Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.18□□□□□ -0.14
XPAP23025 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
XPAP23025 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
XPAP23025 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.18□□□□□ -0.14
XPAP23025 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.18□□□□□ -0.14
XPAP23025 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.18□□□□□ -0.14
XPAP23025 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.18□□□□□ -0.14
XPAP23025 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
XPAP23025 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
XPAP23025 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
XPAP23025 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XPAP23025 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XPAP23025 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XPAP23025 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XPAP23025 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.18□□□□□ -0.14
XPAP23025 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.18□□□□□ -0.14
XPAP23025 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.17□□□□□ -0.14
XPAP23025 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
XPAP23025 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.17□□□□□ -0.14
XPAP23025 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
XPAP23025 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.17□□□□□ -0.14
XPAP23025 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
XPAP23025 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.17□□□□□ -0.14
XPAP23025 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.17□□□□□ -0.14
XPAP23025 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.17□□□□□ -0.14
XPAP23025 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.17□□□□□ -0.14
XPAP23025 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.17□□□□□ -0.14
XPAP23025 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.17□□□□□ -0.14
XPAP23025 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.17□□□□□ -0.14
XPAP23025 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.17□□□□□ -0.14
XPAP23025 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.17□□□□□ -0.14
XPAP23025 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.17□□□□□ -0.14
XPAP23025 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.17□□□□□ -0.14
XPAP23025 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.17□□□□□ -0.14
XPAP23025 RN7SL190P-201ENST00000582519 257 ntBASIC14.17□□□□□ -0.14
XPAP23025 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC14.17□□□□□ -0.14
XPAP23025 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.17□□□□□ -0.14
XPAP23025 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.17□□□□□ -0.14
XPAP23025 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
XPAP23025 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.17□□□□□ -0.14
XPAP23025 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.17□□□□□ -0.14
XPAP23025 HSPA7-201ENST00000445535 1927 ntBASIC14.17□□□□□ -0.14
XPAP23025 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XPAP23025 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.17□□□□□ -0.14
XPAP23025 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.17□□□□□ -0.14
XPAP23025 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.17□□□□□ -0.14
XPAP23025 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
XPAP23025 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC14.16□□□□□ -0.14
XPAP23025 MAPK10-262ENST00000641051 5738 ntBASIC14.16□□□□□ -0.14
XPAP23025 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.16□□□□□ -0.14
XPAP23025 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.16□□□□□ -0.14
XPAP23025 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 AC068760.1-201ENST00000493579 1953 ntBASIC14.16□□□□□ -0.14
XPAP23025 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
XPAP23025 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.16□□□□□ -0.14
XPAP23025 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
XPAP23025 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.16□□□□□ -0.14
XPAP23025 AC090114.2-201ENST00000608477 7054 ntBASIC14.16□□□□□ -0.14
XPAP23025 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.16□□□□□ -0.14
XPAP23025 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
XPAP23025 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.16□□□□□ -0.14
XPAP23025 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
XPAP23025 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 AC090643.2-201ENST00000623442 2029 ntBASIC14.16□□□□□ -0.14
XPAP23025 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 Z69890.1-201ENST00000382990 339 ntBASIC14.16□□□□□ -0.14
XPAP23025 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.16□□□□□ -0.14
XPAP23025 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.16□□□□□ -0.14
XPAP23025 AL512306.1-201ENST00000432698 848 ntBASIC14.16□□□□□ -0.14
XPAP23025 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.16□□□□□ -0.14
XPAP23025 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms