Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 AC027601.3-201ENST00000622907 509 ntBASIC13.33□□□□□ -0.28
CCNA2P20248 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.33□□□□□ -0.28
CCNA2P20248 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.33□□□□□ -0.28
CCNA2P20248 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
CCNA2P20248 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCNA2P20248 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 REXO1L1P-201ENST00000379010 6598 ntBASIC13.33□□□□□ -0.28
CCNA2P20248 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CCNA2P20248 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCNA2P20248 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.32□□□□□ -0.28
CCNA2P20248 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.32□□□□□ -0.28
CCNA2P20248 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CCNA2P20248 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
CCNA2P20248 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CCNA2P20248 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 AC099336.1-201ENST00000417053 1171 ntBASIC13.32□□□□□ -0.28
CCNA2P20248 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCNA2P20248 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.32□□□□□ -0.28
CCNA2P20248 AL355994.2-201ENST00000447882 704 ntBASIC13.32□□□□□ -0.28
CCNA2P20248 CSF2RBP1-201ENST00000447905 391 ntBASIC13.32□□□□□ -0.28
CCNA2P20248 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 IGHV3-71-201ENST00000523324 359 ntBASIC13.32□□□□□ -0.28
CCNA2P20248 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.32□□□□□ -0.28
CCNA2P20248 AC079316.1-201ENST00000548397 411 ntBASIC13.32□□□□□ -0.28
CCNA2P20248 C2orf69P2-201ENST00000562032 1123 ntBASIC13.32□□□□□ -0.28
CCNA2P20248 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CCNA2P20248 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CCNA2P20248 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.32□□□□□ -0.28
CCNA2P20248 AC017083.2-201ENST00000608069 979 ntBASIC13.32□□□□□ -0.28
CCNA2P20248 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CCNA2P20248 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.32□□□□□ -0.28
CCNA2P20248 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CCNA2P20248 AC110048.1-201ENST00000604293 2157 ntBASIC13.32□□□□□ -0.28
CCNA2P20248 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 PCDHB19P-202ENST00000625133 2914 ntBASIC13.32□□□□□ -0.28
CCNA2P20248 AC010970.1-201ENST00000445125 1848 ntBASIC13.32□□□□□ -0.28
CCNA2P20248 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNA2P20248 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 AC027369.3-201ENST00000530465 3707 ntBASIC13.31□□□□□ -0.28
CCNA2P20248 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CCNA2P20248 E2F3P2-201ENST00000447755 1422 ntBASIC13.31□□□□□ -0.28
CCNA2P20248 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCNA2P20248 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.31□□□□□ -0.28
CCNA2P20248 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCNA2P20248 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCNA2P20248 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
CCNA2P20248 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCNA2P20248 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CCNA2P20248 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.31□□□□□ -0.28
CCNA2P20248 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.31□□□□□ -0.28
CCNA2P20248 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.31□□□□□ -0.28
CCNA2P20248 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.31□□□□□ -0.28
CCNA2P20248 CHMP1AP1-201ENST00000445563 662 ntBASIC13.31□□□□□ -0.28
CCNA2P20248 KRT223P-202ENST00000449164 1292 ntBASIC13.31□□□□□ -0.28
CCNA2P20248 AC022210.1-201ENST00000449856 793 ntBASIC13.31□□□□□ -0.28
CCNA2P20248 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.31□□□□□ -0.28
CCNA2P20248 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CCNA2P20248 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.31□□□□□ -0.28
CCNA2P20248 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.31□□□□□ -0.28
CCNA2P20248 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms