Protein–RNA interactions for Protein: O43272

PRODH, Proline dehydrogenase 1, mitochondrial, humanhuman

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRODHO43272 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 SHMT1P1-201ENST00000419974 1312 ntBASIC12.77□□□□□ -0.37
PRODHO43272 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.77□□□□□ -0.37
PRODHO43272 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.77□□□□□ -0.37
PRODHO43272 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
PRODHO43272 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
PRODHO43272 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
PRODHO43272 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.77□□□□□ -0.37
PRODHO43272 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
PRODHO43272 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.77□□□□□ -0.37
PRODHO43272 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
PRODHO43272 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRODHO43272 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.76□□□□□ -0.37
PRODHO43272 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.76□□□□□ -0.37
PRODHO43272 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.76□□□□□ -0.37
PRODHO43272 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PRODHO43272 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.76□□□□□ -0.37
PRODHO43272 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
PRODHO43272 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC12.76□□□□□ -0.37
PRODHO43272 PI4KAP2-201ENST00000360806 2080 ntBASIC12.76□□□□□ -0.37
PRODHO43272 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 AP003969.2-201ENST00000623739 2275 ntBASIC12.76□□□□□ -0.37
PRODHO43272 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
PRODHO43272 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.76□□□□□ -0.37
PRODHO43272 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.76□□□□□ -0.37
PRODHO43272 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.76□□□□□ -0.37
PRODHO43272 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.76□□□□□ -0.37
PRODHO43272 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.76□□□□□ -0.37
PRODHO43272 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.76□□□□□ -0.37
PRODHO43272 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 AC124068.2-201ENST00000569473 1109 ntBASIC12.76□□□□□ -0.37
PRODHO43272 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.76□□□□□ -0.37
PRODHO43272 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.76□□□□□ -0.37
PRODHO43272 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.76□□□□□ -0.37
PRODHO43272 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
PRODHO43272 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC12.76□□□□□ -0.37
PRODHO43272 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
PRODHO43272 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.76□□□□□ -0.37
PRODHO43272 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
PRODHO43272 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRODHO43272 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PRODHO43272 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRODHO43272 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
PRODHO43272 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.75□□□□□ -0.37
PRODHO43272 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
PRODHO43272 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRODHO43272 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRODHO43272 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRODHO43272 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRODHO43272 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRODHO43272 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRODHO43272 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRODHO43272 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms