Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 RN7SL81P-201ENST00000493781 261 ntBASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 NDUFB10P1-201ENST00000567319 521 ntBASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 MIR4722-201ENST00000578292 60 ntBASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 AL133467.4-201ENST00000602953 725 ntBASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 AL021707.6-201ENST00000609212 491 ntBASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 YRDCP1-201ENST00000621419 643 ntBASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 CICP17-201ENST00000418553 2377 ntBASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 AC078991.1-201ENST00000437297 610 ntBASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 ORAOV1P1-201ENST00000503108 395 ntBASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 MRPL22P1-201ENST00000505398 616 ntBASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 AC005740.1-201ENST00000515639 522 ntBASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 AL031713.1-201ENST00000564813 661 ntBASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 MIR3147-201ENST00000577811 66 ntBASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 SPCS2P2-201ENST00000603270 608 ntBASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 AC092171.5-201ENST00000608012 942 ntBASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 AC018635.2-201ENST00000608625 364 ntBASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 AC007881.3-201ENST00000608897 607 ntBASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 TEKT4P2-202ENST00000559466 1312 ntBASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL4A3BPQ9Y5P4 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms