Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 AC025183.3-201ENST00000623526 1482 ntBASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 AC006033.1-201ENST00000440505 426 ntBASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 AC091271.1-201ENST00000611877 1162 ntBASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
UPF3BQ9BZI7 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 EIF4HP1-201ENST00000453115 687 ntBASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 RPL13AP3-202ENST00000494676 1473 ntBASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC16.77■□□□□ 0.28
UPF3BQ9BZI7 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
UPF3BQ9BZI7 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
UPF3BQ9BZI7 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UPF3BQ9BZI7 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
UPF3BQ9BZI7 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UPF3BQ9BZI7 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.77■□□□□ 0.27
UPF3BQ9BZI7 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UPF3BQ9BZI7 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
UPF3BQ9BZI7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.77■□□□□ 0.27
UPF3BQ9BZI7 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms