Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLF2Q8IX21 CSTP2-201ENST00000610599 398 ntBASIC16.62■□□□□ 0.25
SLF2Q8IX21 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.62■□□□□ 0.25
SLF2Q8IX21 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SLF2Q8IX21 TUBB4AP1-201ENST00000450755 1325 ntBASIC16.62■□□□□ 0.25
SLF2Q8IX21 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SLF2Q8IX21 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLF2Q8IX21 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC16.62■□□□□ 0.25
SLF2Q8IX21 CICP16-201ENST00000502609 2813 ntBASIC16.62■□□□□ 0.25
SLF2Q8IX21 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLF2Q8IX21 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC16.62■□□□□ 0.25
SLF2Q8IX21 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SLF2Q8IX21 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SLF2Q8IX21 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLF2Q8IX21 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.62■□□□□ 0.25
SLF2Q8IX21 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLF2Q8IX21 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 FMO6P-201ENST00000236166 1620 ntBASIC16.61■□□□□ 0.25
SLF2Q8IX21 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 AC079250.1-201ENST00000456046 531 ntBASIC16.61■□□□□ 0.25
SLF2Q8IX21 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 MIR3940-201ENST00000579148 102 ntBASIC16.61■□□□□ 0.25
SLF2Q8IX21 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 TP73-201ENST00000346387 4854 ntTSL 5 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 AL109809.1-201ENST00000418979 1367 ntBASIC16.61■□□□□ 0.25
SLF2Q8IX21 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 Z98885.3-201ENST00000624882 1757 ntBASIC16.61■□□□□ 0.25
SLF2Q8IX21 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SLF2Q8IX21 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF2Q8IX21 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLF2Q8IX21 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLF2Q8IX21 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC16.6■□□□□ 0.25
SLF2Q8IX21 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLF2Q8IX21 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC16.6■□□□□ 0.25
SLF2Q8IX21 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLF2Q8IX21 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLF2Q8IX21 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLF2Q8IX21 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLF2Q8IX21 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLF2Q8IX21 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC16.6■□□□□ 0.25
SLF2Q8IX21 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SLF2Q8IX21 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLF2Q8IX21 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLF2Q8IX21 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLF2Q8IX21 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SLF2Q8IX21 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SLF2Q8IX21 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLF2Q8IX21 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.6■□□□□ 0.25
SLF2Q8IX21 VENTXP4-201ENST00000449029 958 ntBASIC16.6■□□□□ 0.25
SLF2Q8IX21 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.6■□□□□ 0.25
SLF2Q8IX21 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.6■□□□□ 0.25
SLF2Q8IX21 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.6■□□□□ 0.25
SLF2Q8IX21 FAM86B3P-203ENST00000523992 854 ntBASIC16.6■□□□□ 0.25
SLF2Q8IX21 AL390728.6-201ENST00000566446 1246 ntBASIC16.6■□□□□ 0.25
SLF2Q8IX21 KRT18P8-201ENST00000581937 1246 ntBASIC16.6■□□□□ 0.25
SLF2Q8IX21 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.6■□□□□ 0.25
SLF2Q8IX21 AC005357.2-202ENST00000590507 1060 ntBASIC16.6■□□□□ 0.25
SLF2Q8IX21 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC16.6■□□□□ 0.25
SLF2Q8IX21 AC244250.3-201ENST00000620749 366 ntBASIC16.6■□□□□ 0.25
SLF2Q8IX21 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.6■□□□□ 0.25
SLF2Q8IX21 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.6■□□□□ 0.25
SLF2Q8IX21 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.6■□□□□ 0.25
SLF2Q8IX21 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SLF2Q8IX21 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms