Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.41□□□□□ -0.42
SEC61A1P61619 AC244157.2-201ENST00000616239 1006 ntBASIC12.41□□□□□ -0.42
SEC61A1P61619 AL008638.5-201ENST00000623814 1298 ntBASIC12.41□□□□□ -0.42
SEC61A1P61619 AC073957.3-201ENST00000609998 6758 ntBASIC12.41□□□□□ -0.42
SEC61A1P61619 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.41□□□□□ -0.42
SEC61A1P61619 MYADML-201ENST00000474610 2147 ntBASIC12.41□□□□□ -0.42
SEC61A1P61619 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.41□□□□□ -0.42
SEC61A1P61619 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.41□□□□□ -0.42
SEC61A1P61619 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SEC61A1P61619 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.41□□□□□ -0.42
SEC61A1P61619 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SEC61A1P61619 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.41□□□□□ -0.42
SEC61A1P61619 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SEC61A1P61619 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SEC61A1P61619 AC015688.4-201ENST00000580780 1647 ntBASIC12.4□□□□□ -0.42
SEC61A1P61619 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 MKRN5P-201ENST00000445263 1467 ntBASIC12.4□□□□□ -0.42
SEC61A1P61619 AC024075.2-201ENST00000598112 1473 ntBASIC12.4□□□□□ -0.42
SEC61A1P61619 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.4□□□□□ -0.42
SEC61A1P61619 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 AL805961.2-201ENST00000642139 4817 ntBASIC12.4□□□□□ -0.42
SEC61A1P61619 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SEC61A1P61619 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.4□□□□□ -0.42
SEC61A1P61619 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
SEC61A1P61619 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 AC135782.3-201ENST00000562782 2105 ntBASIC12.4□□□□□ -0.42
SEC61A1P61619 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.4□□□□□ -0.42
SEC61A1P61619 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 OR2I1P-208ENST00000641137 4948 ntBASIC12.4□□□□□ -0.42
SEC61A1P61619 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SEC61A1P61619 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 MIR1247-201ENST00000408206 136 ntBASIC12.4□□□□□ -0.42
SEC61A1P61619 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.4□□□□□ -0.42
SEC61A1P61619 AC006033.1-201ENST00000440505 426 ntBASIC12.4□□□□□ -0.42
SEC61A1P61619 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
SEC61A1P61619 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.4□□□□□ -0.42
SEC61A1P61619 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.4□□□□□ -0.42
SEC61A1P61619 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.4□□□□□ -0.42
SEC61A1P61619 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.4□□□□□ -0.42
SEC61A1P61619 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.4□□□□□ -0.42
SEC61A1P61619 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 AL358472.3-201ENST00000608147 415 ntBASIC12.4□□□□□ -0.42
SEC61A1P61619 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 AC002472.3-201ENST00000640124 621 ntBASIC12.4□□□□□ -0.42
SEC61A1P61619 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.4□□□□□ -0.42
SEC61A1P61619 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 AC011498.7-201ENST00000624986 2027 ntBASIC12.4□□□□□ -0.42
SEC61A1P61619 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.4□□□□□ -0.42
SEC61A1P61619 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.4□□□□□ -0.42
SEC61A1P61619 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SEC61A1P61619 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SEC61A1P61619 AC003102.2-201ENST00000589195 1469 ntBASIC12.4□□□□□ -0.43
SEC61A1P61619 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
SEC61A1P61619 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SEC61A1P61619 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 AL138725.1-201ENST00000407347 1314 ntBASIC12.39□□□□□ -0.43
SEC61A1P61619 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.39□□□□□ -0.43
SEC61A1P61619 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.39□□□□□ -0.43
SEC61A1P61619 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
SEC61A1P61619 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.39□□□□□ -0.43
SEC61A1P61619 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SEC61A1P61619 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms