Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
AP1S2P56377 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 MIR769-201ENST00000390225 118 ntBASIC13.67□□□□□ -0.22
AP1S2P56377 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 LINC00265-2P-201ENST00000413372 782 ntBASIC13.67□□□□□ -0.22
AP1S2P56377 PPP1R2P4-201ENST00000424051 595 ntBASIC13.67□□□□□ -0.22
AP1S2P56377 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.67□□□□□ -0.22
AP1S2P56377 FNTAP2-201ENST00000430308 634 ntBASIC13.67□□□□□ -0.22
AP1S2P56377 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
AP1S2P56377 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.67□□□□□ -0.22
AP1S2P56377 AL161670.2-201ENST00000557650 1227 ntBASIC13.67□□□□□ -0.22
AP1S2P56377 PHBP15-201ENST00000574228 665 ntBASIC13.67□□□□□ -0.22
AP1S2P56377 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.67□□□□□ -0.22
AP1S2P56377 AL021707.6-201ENST00000609212 491 ntBASIC13.67□□□□□ -0.22
AP1S2P56377 AL161773.1-201ENST00000624845 863 ntBASIC13.67□□□□□ -0.22
AP1S2P56377 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.67□□□□□ -0.22
AP1S2P56377 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
AP1S2P56377 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC13.67□□□□□ -0.22
AP1S2P56377 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.67□□□□□ -0.22
AP1S2P56377 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.67□□□□□ -0.22
AP1S2P56377 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.67□□□□□ -0.22
AP1S2P56377 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 KRT8P43-201ENST00000406052 1458 ntBASIC13.67□□□□□ -0.22
AP1S2P56377 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.67□□□□□ -0.22
AP1S2P56377 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.67□□□□□ -0.22
AP1S2P56377 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP1S2P56377 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.66□□□□□ -0.22
AP1S2P56377 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
AP1S2P56377 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.66□□□□□ -0.22
AP1S2P56377 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
AP1S2P56377 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.66□□□□□ -0.22
AP1S2P56377 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
AP1S2P56377 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.66□□□□□ -0.22
AP1S2P56377 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.66□□□□□ -0.22
AP1S2P56377 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.66□□□□□ -0.22
AP1S2P56377 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
AP1S2P56377 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
AP1S2P56377 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.66□□□□□ -0.22
AP1S2P56377 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.66□□□□□ -0.22
AP1S2P56377 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.66□□□□□ -0.22
AP1S2P56377 AC073869.2-201ENST00000417338 1026 ntBASIC13.66□□□□□ -0.22
AP1S2P56377 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.66□□□□□ -0.22
AP1S2P56377 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.66□□□□□ -0.22
AP1S2P56377 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.66□□□□□ -0.22
AP1S2P56377 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 AC244107.1-201ENST00000442033 332 ntBASIC13.66□□□□□ -0.22
AP1S2P56377 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 RPSAP15-201ENST00000448168 861 ntBASIC13.66□□□□□ -0.22
AP1S2P56377 AC114947.1-202ENST00000514136 344 ntBASIC13.66□□□□□ -0.22
AP1S2P56377 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.66□□□□□ -0.22
AP1S2P56377 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.66□□□□□ -0.22
AP1S2P56377 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
AP1S2P56377 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
AP1S2P56377 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.66□□□□□ -0.22
AP1S2P56377 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
AP1S2P56377 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.66□□□□□ -0.22
AP1S2P56377 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.66□□□□□ -0.22
AP1S2P56377 AL133467.4-201ENST00000602953 725 ntBASIC13.66□□□□□ -0.22
AP1S2P56377 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
AP1S2P56377 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.66□□□□□ -0.22
AP1S2P56377 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.66□□□□□ -0.22
AP1S2P56377 MARK2P16-201ENST00000605714 1723 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms