Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1DP48730 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CSNK1DP48730 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1DP48730 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1DP48730 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.97□□□□□ -0.17
CSNK1DP48730 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1DP48730 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1DP48730 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
CSNK1DP48730 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.97□□□□□ -0.17
CSNK1DP48730 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1DP48730 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CSNK1DP48730 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC13.96□□□□□ -0.17
CSNK1DP48730 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.96□□□□□ -0.17
CSNK1DP48730 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CSNK1DP48730 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CSNK1DP48730 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CSNK1DP48730 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.96□□□□□ -0.17
CSNK1DP48730 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 ACTBP14-201ENST00000411655 1089 ntBASIC13.96□□□□□ -0.17
CSNK1DP48730 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC13.96□□□□□ -0.17
CSNK1DP48730 RPS2P36-201ENST00000456516 831 ntBASIC13.96□□□□□ -0.17
CSNK1DP48730 AC100858.1-201ENST00000514059 1228 ntBASIC13.96□□□□□ -0.17
CSNK1DP48730 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC13.96□□□□□ -0.17
CSNK1DP48730 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.96□□□□□ -0.17
CSNK1DP48730 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.96□□□□□ -0.17
CSNK1DP48730 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CSNK1DP48730 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.96□□□□□ -0.17
CSNK1DP48730 AC011491.1-203ENST00000637688 543 ntBASIC13.96□□□□□ -0.17
CSNK1DP48730 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CSNK1DP48730 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1DP48730 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSNK1DP48730 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CSNK1DP48730 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
CSNK1DP48730 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSNK1DP48730 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC13.96□□□□□ -0.18
CSNK1DP48730 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSNK1DP48730 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSNK1DP48730 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CSNK1DP48730 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC13.96□□□□□ -0.18
CSNK1DP48730 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSNK1DP48730 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CSNK1DP48730 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSNK1DP48730 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1DP48730 CR383656.2-201ENST00000548656 2254 ntBASIC13.95□□□□□ -0.18
CSNK1DP48730 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1DP48730 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1DP48730 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1DP48730 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1DP48730 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1DP48730 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1DP48730 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.95□□□□□ -0.18
CSNK1DP48730 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CSNK1DP48730 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1DP48730 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1DP48730 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CSNK1DP48730 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CSNK1DP48730 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1DP48730 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1DP48730 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.95□□□□□ -0.18
CSNK1DP48730 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1DP48730 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CSNK1DP48730 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1DP48730 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.95□□□□□ -0.18
CSNK1DP48730 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.95□□□□□ -0.18
CSNK1DP48730 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.95□□□□□ -0.18
CSNK1DP48730 AC079112.1-201ENST00000454972 939 ntBASIC13.95□□□□□ -0.18
CSNK1DP48730 CR383656.3-201ENST00000551315 183 ntBASIC13.95□□□□□ -0.18
CSNK1DP48730 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC13.95□□□□□ -0.18
CSNK1DP48730 MIR4649-201ENST00000582839 64 ntBASIC13.95□□□□□ -0.18
CSNK1DP48730 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.95□□□□□ -0.18
CSNK1DP48730 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC13.95□□□□□ -0.18
CSNK1DP48730 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC13.95□□□□□ -0.18
CSNK1DP48730 HELLS-212ENST00000630929 400 ntTSL 5 BASIC13.95□□□□□ -0.18
CSNK1DP48730 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1DP48730 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1DP48730 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1DP48730 ZNF493-208ENST00000599461 1769 ntBASIC13.95□□□□□ -0.18
CSNK1DP48730 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1DP48730 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.95□□□□□ -0.18
CSNK1DP48730 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms