Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RXRBP28702 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RXRBP28702 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.71■□□□□ 0.43
RXRBP28702 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RXRBP28702 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RXRBP28702 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
RXRBP28702 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RXRBP28702 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC17.71■□□□□ 0.43
RXRBP28702 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RXRBP28702 C1QTNF9B-201ENST00000382137 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RXRBP28702 OR2A14-201ENST00000408899 1012 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RXRBP28702 AL133517.1-201ENST00000413412 748 ntBASIC17.71■□□□□ 0.43
RXRBP28702 APOBEC3H-203ENST00000421988 592 ntTSL 5 BASIC17.71■□□□□ 0.43
RXRBP28702 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC17.71■□□□□ 0.43
RXRBP28702 LINC00618-201ENST00000435624 700 ntTSL 5 BASIC17.71■□□□□ 0.43
RXRBP28702 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC17.71■□□□□ 0.43
RXRBP28702 GAPDHP76-201ENST00000512278 976 ntBASIC17.71■□□□□ 0.43
RXRBP28702 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RXRBP28702 AL031058.1-201ENST00000561592 888 ntBASIC17.71■□□□□ 0.43
RXRBP28702 SNORD55-201ENST00000581525 80 ntBASIC17.71■□□□□ 0.43
RXRBP28702 AL033381.2-201ENST00000603854 732 ntBASIC17.71■□□□□ 0.43
RXRBP28702 AC022392.1-201ENST00000609403 744 ntBASIC17.71■□□□□ 0.43
RXRBP28702 MIR6741-201ENST00000618782 63 ntBASIC17.71■□□□□ 0.43
RXRBP28702 GH2-205ENST00000622506 702 ntTSL 5 BASIC17.71■□□□□ 0.43
RXRBP28702 FURIN-208ENST00000640725 224 ntTSL 5 BASIC17.71■□□□□ 0.43
RXRBP28702 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RXRBP28702 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RXRBP28702 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC17.71■□□□□ 0.43
RXRBP28702 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RXRBP28702 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.71■□□□□ 0.43
RXRBP28702 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RXRBP28702 AC068587.6-202ENST00000641839 5619 ntBASIC17.71■□□□□ 0.43
RXRBP28702 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RXRBP28702 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RXRBP28702 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RXRBP28702 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.71■□□□□ 0.42
RXRBP28702 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
RXRBP28702 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RXRBP28702 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RXRBP28702 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RXRBP28702 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RXRBP28702 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.7■□□□□ 0.42
RXRBP28702 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.7■□□□□ 0.42
RXRBP28702 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RXRBP28702 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RXRBP28702 AC018442.1-201ENST00000421439 2061 ntBASIC17.7■□□□□ 0.42
RXRBP28702 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RXRBP28702 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RXRBP28702 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RXRBP28702 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RXRBP28702 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RXRBP28702 CICP6-201ENST00000457191 2729 ntBASIC17.7■□□□□ 0.42
RXRBP28702 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RXRBP28702 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RXRBP28702 U3.49-201ENST00000391065 214 ntBASIC17.7■□□□□ 0.42
RXRBP28702 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RXRBP28702 C2orf27AP2-201ENST00000438438 555 ntBASIC17.7■□□□□ 0.42
RXRBP28702 AC074366.1-204ENST00000446277 552 ntTSL 3 BASIC17.7■□□□□ 0.42
RXRBP28702 BX284656.1-201ENST00000446364 668 ntTSL 3 BASIC17.7■□□□□ 0.42
RXRBP28702 HLA-DRB9-201ENST00000449413 343 ntBASIC17.7■□□□□ 0.42
RXRBP28702 AL031773.1-201ENST00000453579 554 ntTSL 3 BASIC17.7■□□□□ 0.42
RXRBP28702 AC022483.2-201ENST00000461464 555 ntBASIC17.7■□□□□ 0.42
RXRBP28702 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RXRBP28702 RN7SL105P-201ENST00000475661 299 ntBASIC17.7■□□□□ 0.42
RXRBP28702 NUP210P2-201ENST00000510577 282 ntBASIC17.7■□□□□ 0.42
RXRBP28702 HINT1-208ENST00000513012 583 ntTSL 4 BASIC17.7■□□□□ 0.42
RXRBP28702 HNRNPA1P69-201ENST00000552536 933 ntBASIC17.7■□□□□ 0.42
RXRBP28702 AC116553.1-201ENST00000561752 397 ntBASIC17.7■□□□□ 0.42
RXRBP28702 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC17.7■□□□□ 0.42
RXRBP28702 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
RXRBP28702 EIF3K-213ENST00000593149 760 ntTSL 2 BASIC17.7■□□□□ 0.42
RXRBP28702 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC17.7■□□□□ 0.42
RXRBP28702 TTC28-AS1_1.1-201ENST00000614690 162 ntBASIC17.7■□□□□ 0.42
RXRBP28702 AC006581.2-201ENST00000631830 455 ntTSL 3 BASIC17.7■□□□□ 0.42
RXRBP28702 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC17.7■□□□□ 0.42
RXRBP28702 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RXRBP28702 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
RXRBP28702 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RXRBP28702 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RXRBP28702 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC17.7■□□□□ 0.42
RXRBP28702 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RXRBP28702 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RXRBP28702 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RXRBP28702 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RXRBP28702 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RXRBP28702 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.7■□□□□ 0.42
RXRBP28702 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RXRBP28702 POM121L14P-201ENST00000406100 1558 ntBASIC17.7■□□□□ 0.42
RXRBP28702 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.69■□□□□ 0.42
RXRBP28702 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RXRBP28702 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms