Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VARSP26640 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
VARSP26640 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
VARSP26640 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VARSP26640 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VARSP26640 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VARSP26640 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VARSP26640 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.94□□□□□ -0.18
VARSP26640 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.94□□□□□ -0.18
VARSP26640 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
VARSP26640 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VARSP26640 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VARSP26640 HINT2P1-201ENST00000419438 481 ntBASIC13.94□□□□□ -0.18
VARSP26640 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.94□□□□□ -0.18
VARSP26640 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VARSP26640 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC13.94□□□□□ -0.18
VARSP26640 RPL18P13-201ENST00000478088 569 ntBASIC13.94□□□□□ -0.18
VARSP26640 SCARNA21-201ENST00000517026 139 ntBASIC13.94□□□□□ -0.18
VARSP26640 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.94□□□□□ -0.18
VARSP26640 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
VARSP26640 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.94□□□□□ -0.18
VARSP26640 AC008805.1-201ENST00000590892 364 ntBASIC13.94□□□□□ -0.18
VARSP26640 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
VARSP26640 AL137246.1-201ENST00000607072 977 ntBASIC13.94□□□□□ -0.18
VARSP26640 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.94□□□□□ -0.18
VARSP26640 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VARSP26640 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
VARSP26640 AC091812.3-201ENST00000621362 345 ntBASIC13.94□□□□□ -0.18
VARSP26640 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
VARSP26640 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VARSP26640 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.94□□□□□ -0.18
VARSP26640 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
VARSP26640 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.94□□□□□ -0.18
VARSP26640 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VARSP26640 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VARSP26640 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VARSP26640 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
VARSP26640 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.93□□□□□ -0.18
VARSP26640 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
VARSP26640 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.93□□□□□ -0.18
VARSP26640 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
VARSP26640 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
VARSP26640 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VARSP26640 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VARSP26640 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.93□□□□□ -0.18
VARSP26640 AC245884.6-201ENST00000515672 1067 ntBASIC13.93□□□□□ -0.18
VARSP26640 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.93□□□□□ -0.18
VARSP26640 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.93□□□□□ -0.18
VARSP26640 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.93□□□□□ -0.18
VARSP26640 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.93□□□□□ -0.18
VARSP26640 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.93□□□□□ -0.18
VARSP26640 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.93□□□□□ -0.18
VARSP26640 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
VARSP26640 AC006213.5-201ENST00000619673 288 ntBASIC13.93□□□□□ -0.18
VARSP26640 AL023803.2-201ENST00000620080 638 ntBASIC13.93□□□□□ -0.18
VARSP26640 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.93□□□□□ -0.18
VARSP26640 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.93□□□□□ -0.18
VARSP26640 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
VARSP26640 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.93□□□□□ -0.18
VARSP26640 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 KRT8P29-201ENST00000420409 1371 ntBASIC13.93□□□□□ -0.18
VARSP26640 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VARSP26640 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.92□□□□□ -0.18
VARSP26640 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
VARSP26640 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VARSP26640 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
VARSP26640 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
VARSP26640 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.92□□□□□ -0.18
VARSP26640 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
VARSP26640 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VARSP26640 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.92□□□□□ -0.18
VARSP26640 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.92□□□□□ -0.18
VARSP26640 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms