Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CCL1P22362 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.04□□□□□ -0.48
CCL1P22362 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.04□□□□□ -0.48
CCL1P22362 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.04□□□□□ -0.48
CCL1P22362 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.04□□□□□ -0.48
CCL1P22362 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.04□□□□□ -0.48
CCL1P22362 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.04□□□□□ -0.48
CCL1P22362 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.04□□□□□ -0.48
CCL1P22362 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.04□□□□□ -0.48
CCL1P22362 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.04□□□□□ -0.48
CCL1P22362 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.04□□□□□ -0.48
CCL1P22362 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.04□□□□□ -0.48
CCL1P22362 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CCL1P22362 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CCL1P22362 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 PCDHA6-201ENST00000378126 3267 ntBASIC12.04□□□□□ -0.48
CCL1P22362 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
CCL1P22362 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CCL1P22362 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.03□□□□□ -0.48
CCL1P22362 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.03□□□□□ -0.48
CCL1P22362 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.03□□□□□ -0.48
CCL1P22362 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.03□□□□□ -0.48
CCL1P22362 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CCL1P22362 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.03□□□□□ -0.48
CCL1P22362 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CCL1P22362 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.03□□□□□ -0.48
CCL1P22362 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CCL1P22362 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 RCC2P5-201ENST00000492126 1487 ntBASIC12.03□□□□□ -0.48
CCL1P22362 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.03□□□□□ -0.48
CCL1P22362 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CCL1P22362 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CCL1P22362 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 RN7SKP214-201ENST00000364208 315 ntBASIC12.03□□□□□ -0.48
CCL1P22362 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 PPP1R2P4-201ENST00000424051 595 ntBASIC12.03□□□□□ -0.48
CCL1P22362 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.03□□□□□ -0.48
CCL1P22362 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CCL1P22362 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.03□□□□□ -0.48
CCL1P22362 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.03□□□□□ -0.48
CCL1P22362 IGHV3-71-201ENST00000523324 359 ntBASIC12.03□□□□□ -0.48
CCL1P22362 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
CCL1P22362 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.03□□□□□ -0.48
CCL1P22362 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CCL1P22362 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.03□□□□□ -0.48
CCL1P22362 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.03□□□□□ -0.48
CCL1P22362 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.03□□□□□ -0.48
CCL1P22362 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
CCL1P22362 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.03□□□□□ -0.48
CCL1P22362 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 AL021707.6-201ENST00000609212 491 ntBASIC12.03□□□□□ -0.48
CCL1P22362 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.03□□□□□ -0.48
CCL1P22362 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.03□□□□□ -0.48
CCL1P22362 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.03□□□□□ -0.48
CCL1P22362 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.03□□□□□ -0.48
CCL1P22362 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.03□□□□□ -0.48
CCL1P22362 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.03□□□□□ -0.48
CCL1P22362 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.03□□□□□ -0.48
CCL1P22362 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms