Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 CTBP2P8-201ENST00000422584 1330 ntBASIC16.26■□□□□ 0.19
ERCC3P19447 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.26■□□□□ 0.19
ERCC3P19447 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC3P19447 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC3P19447 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.26■□□□□ 0.19
ERCC3P19447 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ERCC3P19447 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC3P19447 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ERCC3P19447 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC3P19447 RN7SL788P-201ENST00000460504 316 ntBASIC16.26■□□□□ 0.19
ERCC3P19447 NSD1-211ENST00000511258 809 ntTSL 3 BASIC16.26■□□□□ 0.19
ERCC3P19447 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC3P19447 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.26■□□□□ 0.19
ERCC3P19447 AC002472.4-201ENST00000641915 272 ntBASIC16.26■□□□□ 0.19
ERCC3P19447 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC3P19447 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC3P19447 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
ERCC3P19447 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.26■□□□□ 0.19
ERCC3P19447 CICP20-201ENST00000443330 2801 ntBASIC16.26■□□□□ 0.19
ERCC3P19447 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ERCC3P19447 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC3P19447 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ERCC3P19447 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC3P19447 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC3P19447 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ERCC3P19447 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ERCC3P19447 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.25■□□□□ 0.19
ERCC3P19447 LINC00265-2P-201ENST00000413372 782 ntBASIC16.25■□□□□ 0.19
ERCC3P19447 AC108734.2-201ENST00000420887 1069 ntBASIC16.25■□□□□ 0.19
ERCC3P19447 AQP7P5-201ENST00000428759 1049 ntBASIC16.25■□□□□ 0.19
ERCC3P19447 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC3P19447 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC3P19447 AQP7P4-201ENST00000447083 1042 ntBASIC16.25■□□□□ 0.19
ERCC3P19447 GNG10P1-201ENST00000452289 199 ntBASIC16.25■□□□□ 0.19
ERCC3P19447 GRPEL2P1-201ENST00000453145 339 ntBASIC16.25■□□□□ 0.19
ERCC3P19447 AQP7P2-201ENST00000453967 1041 ntBASIC16.25■□□□□ 0.19
ERCC3P19447 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 PGAM1P12-201ENST00000505622 748 ntBASIC16.25■□□□□ 0.19
ERCC3P19447 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.25■□□□□ 0.19
ERCC3P19447 AC093826.1-201ENST00000508655 993 ntBASIC16.25■□□□□ 0.19
ERCC3P19447 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.25■□□□□ 0.19
ERCC3P19447 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC16.25■□□□□ 0.19
ERCC3P19447 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC3P19447 AL022344.2-201ENST00000568976 968 ntBASIC16.25■□□□□ 0.19
ERCC3P19447 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.25■□□□□ 0.19
ERCC3P19447 AC011247.3-201ENST00000603297 438 ntBASIC16.25■□□□□ 0.19
ERCC3P19447 AL118522.1-201ENST00000611368 560 ntBASIC16.25■□□□□ 0.19
ERCC3P19447 AQP7P3-201ENST00000624547 1041 ntBASIC16.25■□□□□ 0.19
ERCC3P19447 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC3P19447 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ERCC3P19447 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC3P19447 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ERCC3P19447 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.25■□□□□ 0.19
ERCC3P19447 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ERCC3P19447 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC3P19447 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ERCC3P19447 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ERCC3P19447 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC3P19447 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms