Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 TUBB8P4-201ENST00000511806 1324 ntBASIC18.79■□□□□ 0.6
ATF3P18847 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATF3P18847 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 AL031577.1-201ENST00000339867 399 ntBASIC18.79■□□□□ 0.6
ATF3P18847 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 OR7E122P-201ENST00000383606 1017 ntBASIC18.79■□□□□ 0.6
ATF3P18847 MIR766-201ENST00000390223 111 ntBASIC18.79■□□□□ 0.6
ATF3P18847 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
ATF3P18847 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC18.79■□□□□ 0.6
ATF3P18847 HLA-DQB3-203ENST00000425319 356 ntBASIC18.79■□□□□ 0.6
ATF3P18847 RN7SL22P-201ENST00000471800 269 ntBASIC18.79■□□□□ 0.6
ATF3P18847 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
ATF3P18847 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC18.79■□□□□ 0.6
ATF3P18847 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC18.79■□□□□ 0.6
ATF3P18847 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ATF3P18847 MIR4309-201ENST00000582498 83 ntBASIC18.79■□□□□ 0.6
ATF3P18847 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATF3P18847 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC18.79■□□□□ 0.6
ATF3P18847 CDIPT-AS1-203ENST00000638164 713 ntBASIC18.79■□□□□ 0.6
ATF3P18847 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
ATF3P18847 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.79■□□□□ 0.6
ATF3P18847 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.79■□□□□ 0.6
ATF3P18847 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.79■□□□□ 0.6
ATF3P18847 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF3P18847 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ATF3P18847 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC18.78■□□□□ 0.6
ATF3P18847 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATF3P18847 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF3P18847 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATF3P18847 HSPA8P5-201ENST00000456928 2069 ntBASIC18.78■□□□□ 0.6
ATF3P18847 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF3P18847 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC18.78■□□□□ 0.6
ATF3P18847 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF3P18847 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ATF3P18847 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
ATF3P18847 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF3P18847 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF3P18847 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATF3P18847 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
ATF3P18847 SNORA30.1-201ENST00000363193 129 ntBASIC18.78■□□□□ 0.6
ATF3P18847 AL627095.1-201ENST00000414775 321 ntBASIC18.78■□□□□ 0.6
ATF3P18847 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC18.78■□□□□ 0.6
ATF3P18847 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC18.78■□□□□ 0.6
ATF3P18847 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATF3P18847 PDPN-208ENST00000509009 571 ntTSL 4 BASIC18.78■□□□□ 0.6
ATF3P18847 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC18.78■□□□□ 0.6
ATF3P18847 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC18.78■□□□□ 0.6
ATF3P18847 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC18.78■□□□□ 0.6
ATF3P18847 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATF3P18847 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC18.78■□□□□ 0.6
ATF3P18847 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC18.78■□□□□ 0.6
ATF3P18847 MIR6165-201ENST00000614803 84 ntBASIC18.78■□□□□ 0.6
ATF3P18847 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF3P18847 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATF3P18847 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
ATF3P18847 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF3P18847 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF3P18847 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATF3P18847 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ATF3P18847 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATF3P18847 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATF3P18847 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATF3P18847 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATF3P18847 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC18.77■□□□□ 0.6
ATF3P18847 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.77■□□□□ 0.6
ATF3P18847 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATF3P18847 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATF3P18847 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATF3P18847 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATF3P18847 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ATF3P18847 RN7SL646P-201ENST00000492969 297 ntBASIC18.77■□□□□ 0.6
ATF3P18847 AC010395.2-201ENST00000509899 904 ntBASIC18.77■□□□□ 0.6
ATF3P18847 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC18.77■□□□□ 0.6
ATF3P18847 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ATF3P18847 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC18.77■□□□□ 0.6
ATF3P18847 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC18.77■□□□□ 0.6
ATF3P18847 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATF3P18847 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATF3P18847 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATF3P18847 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ATF3P18847 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATF3P18847 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms