Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.01□□□□□ -0.65
CD28P10747 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CD28P10747 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 AC104581.4-201ENST00000623126 3052 ntBASIC11.01□□□□□ -0.65
CD28P10747 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CD28P10747 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CD28P10747 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.01□□□□□ -0.65
CD28P10747 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CD28P10747 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
CD28P10747 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.01□□□□□ -0.65
CD28P10747 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CD28P10747 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11□□□□□ -0.65
CD28P10747 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC11□□□□□ -0.65
CD28P10747 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11□□□□□ -0.65
CD28P10747 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11□□□□□ -0.65
CD28P10747 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC11□□□□□ -0.65
CD28P10747 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CD28P10747 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC11□□□□□ -0.65
CD28P10747 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC11□□□□□ -0.65
CD28P10747 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
CD28P10747 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC11□□□□□ -0.65
CD28P10747 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CD28P10747 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CD28P10747 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 GRPEL2P1-201ENST00000453145 339 ntBASIC11□□□□□ -0.65
CD28P10747 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC11□□□□□ -0.65
CD28P10747 TPT1P11-201ENST00000458482 498 ntBASIC11□□□□□ -0.65
CD28P10747 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CD28P10747 AL157792.1-201ENST00000488281 530 ntBASIC11□□□□□ -0.65
CD28P10747 LINC00634-202ENST00000505157 222 ntBASIC11□□□□□ -0.65
CD28P10747 HINT1-205ENST00000508488 703 ntTSL 2 BASIC11□□□□□ -0.65
CD28P10747 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC11□□□□□ -0.65
CD28P10747 ALG1L6P-201ENST00000515248 758 ntBASIC11□□□□□ -0.65
CD28P10747 AL512310.5-201ENST00000551999 515 ntBASIC11□□□□□ -0.65
CD28P10747 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC11□□□□□ -0.65
CD28P10747 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC11□□□□□ -0.65
CD28P10747 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC11□□□□□ -0.65
CD28P10747 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC11□□□□□ -0.65
CD28P10747 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC11□□□□□ -0.65
CD28P10747 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
CD28P10747 GAS7-216ENST00000583882 553 ntTSL 5 BASIC11□□□□□ -0.65
CD28P10747 TP53-221ENST00000615910 1149 ntTSL 5 BASIC11□□□□□ -0.65
CD28P10747 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC11□□□□□ -0.65
CD28P10747 LINC00244-201ENST00000625073 613 ntBASIC11□□□□□ -0.65
CD28P10747 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC11□□□□□ -0.65
CD28P10747 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC11□□□□□ -0.65
CD28P10747 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CD28P10747 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11□□□□□ -0.65
CD28P10747 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC11□□□□□ -0.65
CD28P10747 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CD28P10747 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11□□□□□ -0.65
CD28P10747 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11□□□□□ -0.65
CD28P10747 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11□□□□□ -0.65
CD28P10747 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11□□□□□ -0.65
CD28P10747 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CD28P10747 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
CD28P10747 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms