Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM3P06753 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC15.79■□□□□ 0.12
TPM3P06753 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM3P06753 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM3P06753 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.79■□□□□ 0.12
TPM3P06753 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM3P06753 KRT18P15-201ENST00000458108 1291 ntBASIC15.79■□□□□ 0.12
TPM3P06753 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.79■□□□□ 0.12
TPM3P06753 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM3P06753 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM3P06753 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.79■□□□□ 0.12
TPM3P06753 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.79■□□□□ 0.12
TPM3P06753 OR10B1P-201ENST00000601666 907 ntBASIC15.79■□□□□ 0.12
TPM3P06753 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.79■□□□□ 0.12
TPM3P06753 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.79■□□□□ 0.12
TPM3P06753 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPM3P06753 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
TPM3P06753 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPM3P06753 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM3P06753 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TPM3P06753 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM3P06753 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM3P06753 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC15.79■□□□□ 0.12
TPM3P06753 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM3P06753 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC15.79■□□□□ 0.12
TPM3P06753 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
TPM3P06753 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM3P06753 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.78■□□□□ 0.12
TPM3P06753 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.78■□□□□ 0.12
TPM3P06753 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.78■□□□□ 0.12
TPM3P06753 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TPM3P06753 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.78■□□□□ 0.12
TPM3P06753 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 AL590824.1-201ENST00000403828 1349 ntBASIC15.78■□□□□ 0.12
TPM3P06753 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TPM3P06753 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TPM3P06753 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.78■□□□□ 0.12
TPM3P06753 SNORA50C-201ENST00000408535 133 ntBASIC15.78■□□□□ 0.12
TPM3P06753 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.78■□□□□ 0.12
TPM3P06753 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.78■□□□□ 0.12
TPM3P06753 FAM8A4P-201ENST00000435433 1213 ntBASIC15.78■□□□□ 0.12
TPM3P06753 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 INGX-202ENST00000489074 768 ntBASIC15.78■□□□□ 0.12
TPM3P06753 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.78■□□□□ 0.12
TPM3P06753 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.78■□□□□ 0.12
TPM3P06753 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.78■□□□□ 0.12
TPM3P06753 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.78■□□□□ 0.12
TPM3P06753 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.78■□□□□ 0.12
TPM3P06753 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TPM3P06753 CHCHD2P3-201ENST00000603038 451 ntBASIC15.78■□□□□ 0.12
TPM3P06753 WFDC1-204ENST00000613603 549 ntBASIC15.78■□□□□ 0.12
TPM3P06753 AC106028.4-201ENST00000614509 607 ntBASIC15.78■□□□□ 0.12
TPM3P06753 SNORA50.1-201ENST00000628590 135 ntBASIC15.78■□□□□ 0.12
TPM3P06753 AL033527.5-201ENST00000641382 801 ntBASIC15.78■□□□□ 0.12
TPM3P06753 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC15.78■□□□□ 0.12
TPM3P06753 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 OS9-203ENST00000389142 2457 ntTSL 5 BASIC15.78■□□□□ 0.12
TPM3P06753 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC15.78■□□□□ 0.12
TPM3P06753 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC15.78■□□□□ 0.12
TPM3P06753 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC15.78■□□□□ 0.12
TPM3P06753 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TPM3P06753 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 AC020917.4-201ENST00000623994 1999 ntBASIC15.78■□□□□ 0.12
TPM3P06753 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TPM3P06753 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.78■□□□□ 0.12
TPM3P06753 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM3P06753 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC15.78■□□□□ 0.12
TPM3P06753 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TPM3P06753 LINC00638-201ENST00000555578 2518 ntBASIC15.77■□□□□ 0.12
TPM3P06753 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC15.77■□□□□ 0.12
TPM3P06753 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TPM3P06753 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TPM3P06753 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC15.77■□□□□ 0.12
TPM3P06753 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TPM3P06753 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TPM3P06753 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TPM3P06753 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.77■□□□□ 0.12
TPM3P06753 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC15.77■□□□□ 0.12
TPM3P06753 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms