Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SMAD6O43541 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SMAD6O43541 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SMAD6O43541 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SMAD6O43541 MIR1307-201ENST00000408840 149 ntBASIC14.09□□□□□ -0.15
SMAD6O43541 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.09□□□□□ -0.15
SMAD6O43541 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.09□□□□□ -0.15
SMAD6O43541 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC14.09□□□□□ -0.15
SMAD6O43541 AC025186.1-201ENST00000478174 870 ntBASIC14.09□□□□□ -0.15
SMAD6O43541 EEF1GP8-201ENST00000506566 1154 ntBASIC14.09□□□□□ -0.15
SMAD6O43541 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.09□□□□□ -0.15
SMAD6O43541 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.09□□□□□ -0.15
SMAD6O43541 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC14.09□□□□□ -0.15
SMAD6O43541 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.09□□□□□ -0.15
SMAD6O43541 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SMAD6O43541 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.09□□□□□ -0.15
SMAD6O43541 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.09□□□□□ -0.15
SMAD6O43541 AC012073.1-201ENST00000606114 1108 ntBASIC14.09□□□□□ -0.15
SMAD6O43541 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SMAD6O43541 AC105137.3-201ENST00000617588 984 ntBASIC14.09□□□□□ -0.15
SMAD6O43541 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
SMAD6O43541 SALL4P6-201ENST00000429385 1691 ntBASIC14.09□□□□□ -0.15
SMAD6O43541 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.09□□□□□ -0.15
SMAD6O43541 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 AC104581.4-201ENST00000623126 3052 ntBASIC14.09□□□□□ -0.15
SMAD6O43541 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.09□□□□□ -0.15
SMAD6O43541 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
SMAD6O43541 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 AC067750.1-201ENST00000608826 6545 ntBASIC14.09□□□□□ -0.15
SMAD6O43541 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
SMAD6O43541 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 AC089987.1-201ENST00000551654 2209 ntBASIC14.09□□□□□ -0.15
SMAD6O43541 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SMAD6O43541 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SMAD6O43541 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SMAD6O43541 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SMAD6O43541 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.08□□□□□ -0.15
SMAD6O43541 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SMAD6O43541 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SMAD6O43541 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.08□□□□□ -0.15
SMAD6O43541 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMAD6O43541 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.08□□□□□ -0.16
SMAD6O43541 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SMAD6O43541 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC14.08□□□□□ -0.16
SMAD6O43541 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMAD6O43541 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMAD6O43541 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.08□□□□□ -0.16
SMAD6O43541 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMAD6O43541 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SMAD6O43541 AC025183.3-201ENST00000623526 1482 ntBASIC14.08□□□□□ -0.16
SMAD6O43541 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMAD6O43541 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.08□□□□□ -0.16
SMAD6O43541 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMAD6O43541 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SMAD6O43541 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.08□□□□□ -0.16
SMAD6O43541 AC041040.2-201ENST00000622926 2899 ntBASIC14.08□□□□□ -0.16
SMAD6O43541 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.08□□□□□ -0.16
SMAD6O43541 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMAD6O43541 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMAD6O43541 OR2W2P-201ENST00000406313 909 ntBASIC14.08□□□□□ -0.16
SMAD6O43541 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.08□□□□□ -0.16
SMAD6O43541 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.08□□□□□ -0.16
SMAD6O43541 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC14.08□□□□□ -0.16
SMAD6O43541 AC100858.1-201ENST00000514059 1228 ntBASIC14.08□□□□□ -0.16
SMAD6O43541 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.08□□□□□ -0.16
SMAD6O43541 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.08□□□□□ -0.16
SMAD6O43541 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SMAD6O43541 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.08□□□□□ -0.16
SMAD6O43541 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC14.08□□□□□ -0.16
SMAD6O43541 AP001065.2-201ENST00000617205 644 ntBASIC14.08□□□□□ -0.16
SMAD6O43541 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.08□□□□□ -0.16
SMAD6O43541 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SMAD6O43541 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.08□□□□□ -0.16
SMAD6O43541 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14.08□□□□□ -0.16
SMAD6O43541 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.08□□□□□ -0.16
SMAD6O43541 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.08□□□□□ -0.16
SMAD6O43541 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SMAD6O43541 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMAD6O43541 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMAD6O43541 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMAD6O43541 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms