Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 AC078875.1-201ENST00000431907 724 ntBASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 SERPINA13P-202ENST00000478994 924 ntBASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 AC005740.2-201ENST00000511085 419 ntBASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 AC126915.1-201ENST00000522847 1038 ntBASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 CFL1-212ENST00000531413 636 ntTSL 3 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 EID1-202ENST00000560490 584 ntTSL 3 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 AC090164.2-201ENST00000611487 516 ntBASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 ABBA01031663.1-201ENST00000635630 790 ntBASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 AL033527.4-201ENST00000641026 673 ntBASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 AC068587.8-201ENST00000641239 219 ntBASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 CCT8L1P-201ENST00000465400 1674 ntBASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HLA-DRB4X5D2U9 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 AP002761.4-201ENST00000565433 3361 ntBASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 REXO1L1P-201ENST00000379010 6598 ntBASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 RHPN1-AS1-201ENST00000518049 1918 ntBASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 AC073869.1-201ENST00000415574 2762 ntBASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms