Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 PGAM1P5-201ENST00000548011 764 ntBASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 AL160314.3-201ENST00000556041 767 ntBASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 RN7SL560P-201ENST00000577943 264 ntBASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 MIR4783-201ENST00000580343 82 ntBASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 KRT8P29-201ENST00000420409 1371 ntBASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 C8orf49-201ENST00000525043 1968 ntBASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
POLR1DQ9Y2S0 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 AC018629.1-201ENST00000623381 1736 ntBASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 AL445209.1-201ENST00000607269 3491 ntBASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 RNMTL1P1-201ENST00000454103 560 ntBASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 AC005730.2-201ENST00000564549 1184 ntBASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 AL023803.2-201ENST00000620080 638 ntBASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.62□□□□□ -0.39
POLR1DQ9Y2S0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 CYP4F23P-201ENST00000593402 1579 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms