Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AL359881.3-201ENST00000602640 1721 ntBASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 AL928921.2-201ENST00000641325 2442 ntBASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 LINC01815-202ENST00000641468 1409 ntBASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 AC006987.1-201ENST00000413610 527 ntBASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 AC012618.1-201ENST00000461223 412 ntBASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 RN7SL277P-201ENST00000481521 288 ntBASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 GOLGA2P8-201ENST00000505201 779 ntBASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 AC024681.1-201ENST00000521917 487 ntBASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PARPBPQ9NWS1 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 KRT18P9-201ENST00000604826 1300 ntBASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 CSPG4P11-201ENST00000560634 4910 ntBASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 BANF1P3-201ENST00000412556 261 ntBASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 RN7SL258P-201ENST00000478664 300 ntBASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 AC008132.1-202ENST00000342005 1389 ntBASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms