Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 AC005829.1-201ENST00000570002 483 ntBASIC10.52□□□□□ -0.73
NUP35Q8NFH5 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 SRD5A3P1-201ENST00000603021 949 ntBASIC10.52□□□□□ -0.73
NUP35Q8NFH5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 AL845472.1-202ENST00000624675 4080 ntBASIC10.52□□□□□ -0.73
NUP35Q8NFH5 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 BTBD7P1-201ENST00000447253 1453 ntBASIC10.51□□□□□ -0.73
NUP35Q8NFH5 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 AC027369.6-201ENST00000525520 931 ntBASIC10.51□□□□□ -0.73
NUP35Q8NFH5 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 AL512310.5-201ENST00000551999 515 ntBASIC10.51□□□□□ -0.73
NUP35Q8NFH5 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 AC138466.3-201ENST00000619983 221 ntBASIC10.51□□□□□ -0.73
NUP35Q8NFH5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 AL590824.1-201ENST00000403828 1349 ntBASIC10.51□□□□□ -0.73
NUP35Q8NFH5 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 AC009093.2-202ENST00000620513 2079 ntBASIC10.51□□□□□ -0.73
NUP35Q8NFH5 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC10.51□□□□□ -0.73
NUP35Q8NFH5 AL354861.3-201ENST00000600140 2412 ntBASIC10.5□□□□□ -0.73
NUP35Q8NFH5 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
NUP35Q8NFH5 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
NUP35Q8NFH5 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
NUP35Q8NFH5 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
NUP35Q8NFH5 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC10.5□□□□□ -0.73
NUP35Q8NFH5 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms