Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 AL807761.2-201ENST00000422849 729 ntBASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 IGLV3-15-201ENST00000518356 244 ntBASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 CHMP4BP1-201ENST00000556017 588 ntBASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 AC089987.1-201ENST00000551654 2209 ntBASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 KRT8P43-201ENST00000406052 1458 ntBASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT1Q8NF37 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 AL137784.3-201ENST00000623858 2288 ntBASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 IMP3P2-201ENST00000489760 475 ntBASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 KRT18P8-201ENST00000581937 1246 ntBASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 CR392039.2-201ENST00000623182 509 ntBASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms