Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 PARVG-208ENST00000466375 820 ntTSL 2 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 USP8-219ENST00000625664 1568 ntTSL 5 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 NLK-203ENST00000582037 1503 ntTSL 2 BASIC13.33□□□□□ -0.27
RIF1Q5UIP0 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RIF1Q5UIP0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.33□□□□□ -0.27
RIF1Q5UIP0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 AC114812.4-201ENST00000506676 757 ntBASIC13.33□□□□□ -0.28
RIF1Q5UIP0 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 DHRS7-202ENST00000536410 1194 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 AL391005.1-201ENST00000623953 2435 ntBASIC13.33□□□□□ -0.28
RIF1Q5UIP0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 KRT8P25-201ENST00000473150 1456 ntBASIC13.33□□□□□ -0.28
RIF1Q5UIP0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 PCDHA3-202ENST00000532566 4594 ntBASIC13.33□□□□□ -0.28
RIF1Q5UIP0 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 KLK8-203ENST00000347619 555 ntTSL 2 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 TSACC-203ENST00000368253 512 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 AC007274.3-201ENST00000619838 385 ntBASIC13.33□□□□□ -0.28
RIF1Q5UIP0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
RIF1Q5UIP0 AC091951.1-201ENST00000512854 2465 ntBASIC13.32□□□□□ -0.28
RIF1Q5UIP0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 ABCB4-201ENST00000265723 4020 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 AL356583.3-201ENST00000412354 417 ntBASIC13.32□□□□□ -0.28
RIF1Q5UIP0 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 HNRNPA1P9-201ENST00000450624 950 ntBASIC13.32□□□□□ -0.28
RIF1Q5UIP0 AC079944.2-201ENST00000478867 734 ntBASIC13.32□□□□□ -0.28
RIF1Q5UIP0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms