Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 RNA5SP491-201ENST00000362936 118 ntBASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 CDCA4P4-201ENST00000435216 680 ntBASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 RNLS-203ENST00000437752 525 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 AC007279.1-201ENST00000448547 837 ntBASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 VDAC1P11-201ENST00000458323 852 ntBASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 AL590235.1-201ENST00000564650 861 ntBASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 AC018846.1-201ENST00000568231 183 ntBASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 AC148477.9-201ENST00000623974 539 ntBASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 SNU13-204ENST00000402458 462 ntTSL 3 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 FAM187B2P-201ENST00000577135 713 ntBASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM71Q2Q1W2 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 TNRC18P2-201ENST00000417666 2714 ntBASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 AC133141.1-201ENST00000443015 339 ntBASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 AC104212.2-201ENST00000478813 628 ntBASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 AC092612.1-201ENST00000514501 998 ntBASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 HNRNPA1P16-201ENST00000575692 955 ntBASIC15.1■□□□□ 0.01
TRIM71Q2Q1W2 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms