Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.61□□□□□ -0.39
CAV3P56539 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.61□□□□□ -0.39
CAV3P56539 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CAV3P56539 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CAV3P56539 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.61□□□□□ -0.39
CAV3P56539 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CAV3P56539 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CAV3P56539 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.61□□□□□ -0.39
CAV3P56539 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.61□□□□□ -0.39
CAV3P56539 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.61□□□□□ -0.39
CAV3P56539 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.61□□□□□ -0.39
CAV3P56539 AK2P2-201ENST00000439142 405 ntBASIC12.61□□□□□ -0.39
CAV3P56539 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CAV3P56539 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.61□□□□□ -0.39
CAV3P56539 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.61□□□□□ -0.39
CAV3P56539 AP001889.1-201ENST00000525414 633 ntBASIC12.61□□□□□ -0.39
CAV3P56539 SLC25A47P1-201ENST00000531577 414 ntBASIC12.61□□□□□ -0.39
CAV3P56539 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 AC005586.2-201ENST00000563946 837 ntBASIC12.61□□□□□ -0.39
CAV3P56539 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.61□□□□□ -0.39
CAV3P56539 AC106886.1-201ENST00000568660 600 ntBASIC12.61□□□□□ -0.39
CAV3P56539 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.61□□□□□ -0.39
CAV3P56539 AC138696.2-201ENST00000607376 223 ntBASIC12.61□□□□□ -0.39
CAV3P56539 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.61□□□□□ -0.39
CAV3P56539 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 AGGF1P10-201ENST00000635005 2191 ntBASIC12.61□□□□□ -0.39
CAV3P56539 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 PDIA3P1-201ENST00000471856 1510 ntBASIC12.61□□□□□ -0.39
CAV3P56539 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.61□□□□□ -0.39
CAV3P56539 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CAV3P56539 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CAV3P56539 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.61□□□□□ -0.39
CAV3P56539 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.61□□□□□ -0.39
CAV3P56539 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CAV3P56539 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CAV3P56539 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CAV3P56539 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.6□□□□□ -0.39
CAV3P56539 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.6□□□□□ -0.39
CAV3P56539 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.6□□□□□ -0.39
CAV3P56539 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.6□□□□□ -0.39
CAV3P56539 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
CAV3P56539 AC107375.1-201ENST00000564464 2231 ntBASIC12.6□□□□□ -0.39
CAV3P56539 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.6□□□□□ -0.39
CAV3P56539 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CAV3P56539 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.6□□□□□ -0.39
CAV3P56539 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.6□□□□□ -0.39
CAV3P56539 AC005034.1-201ENST00000426657 489 ntBASIC12.6□□□□□ -0.39
CAV3P56539 KRT43P-201ENST00000434019 910 ntBASIC12.6□□□□□ -0.39
CAV3P56539 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.6□□□□□ -0.39
CAV3P56539 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CAV3P56539 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.6□□□□□ -0.39
CAV3P56539 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.6□□□□□ -0.39
CAV3P56539 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
CAV3P56539 AC027237.1-201ENST00000560942 655 ntBASIC12.6□□□□□ -0.39
CAV3P56539 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
CAV3P56539 BTNL10-201ENST00000595971 695 ntBASIC12.6□□□□□ -0.39
CAV3P56539 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.6□□□□□ -0.39
CAV3P56539 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.6□□□□□ -0.39
CAV3P56539 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.6□□□□□ -0.39
CAV3P56539 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.6□□□□□ -0.39
CAV3P56539 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CAV3P56539 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 LINC00638-201ENST00000555578 2518 ntBASIC12.6□□□□□ -0.39
CAV3P56539 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms