Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
EFNA3P52797 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.12□□□□□ -0.31
EFNA3P52797 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.12□□□□□ -0.31
EFNA3P52797 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
EFNA3P52797 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.12□□□□□ -0.31
EFNA3P52797 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
EFNA3P52797 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC13.12□□□□□ -0.31
EFNA3P52797 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.12□□□□□ -0.31
EFNA3P52797 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
EFNA3P52797 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 AC008620.2-201ENST00000510294 1569 ntBASIC13.11□□□□□ -0.31
EFNA3P52797 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 KRT8P24-201ENST00000560290 1559 ntBASIC13.11□□□□□ -0.31
EFNA3P52797 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
EFNA3P52797 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.11□□□□□ -0.31
EFNA3P52797 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
EFNA3P52797 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
EFNA3P52797 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
EFNA3P52797 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 RNVU1-8-201ENST00000364272 125 ntBASIC13.11□□□□□ -0.31
EFNA3P52797 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
EFNA3P52797 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.11□□□□□ -0.31
EFNA3P52797 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.11□□□□□ -0.31
EFNA3P52797 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC13.11□□□□□ -0.31
EFNA3P52797 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
EFNA3P52797 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 AC092573.1-201ENST00000433054 884 ntBASIC13.11□□□□□ -0.31
EFNA3P52797 AL354861.1-201ENST00000445213 355 ntBASIC13.11□□□□□ -0.31
EFNA3P52797 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
EFNA3P52797 IGHV1-12-201ENST00000518307 205 ntBASIC13.11□□□□□ -0.31
EFNA3P52797 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
EFNA3P52797 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
EFNA3P52797 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.11□□□□□ -0.31
EFNA3P52797 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.11□□□□□ -0.31
EFNA3P52797 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
EFNA3P52797 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.11□□□□□ -0.31
EFNA3P52797 MIR6858-201ENST00000620733 67 ntBASIC13.11□□□□□ -0.31
EFNA3P52797 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
EFNA3P52797 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC13.11□□□□□ -0.31
EFNA3P52797 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.11□□□□□ -0.31
EFNA3P52797 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.11□□□□□ -0.31
EFNA3P52797 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
EFNA3P52797 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
EFNA3P52797 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.1□□□□□ -0.31
EFNA3P52797 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
EFNA3P52797 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
EFNA3P52797 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNA3P52797 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.1□□□□□ -0.31
EFNA3P52797 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
EFNA3P52797 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 OR52M2P-201ENST00000414298 959 ntBASIC13.1□□□□□ -0.31
EFNA3P52797 EEF1DP2-201ENST00000433698 843 ntBASIC13.1□□□□□ -0.31
EFNA3P52797 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC13.1□□□□□ -0.31
EFNA3P52797 RPL7P35-201ENST00000446943 740 ntBASIC13.1□□□□□ -0.31
EFNA3P52797 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC13.1□□□□□ -0.31
EFNA3P52797 DPY19L2P5-201ENST00000456300 331 ntBASIC13.1□□□□□ -0.31
EFNA3P52797 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.1□□□□□ -0.31
EFNA3P52797 AL132994.1-201ENST00000554098 400 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms