Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC18.41■□□□□ 0.54
USP6P35125 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC18.41■□□□□ 0.54
USP6P35125 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
USP6P35125 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC18.41■□□□□ 0.54
USP6P35125 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC18.41■□□□□ 0.54
USP6P35125 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC18.41■□□□□ 0.54
USP6P35125 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC18.41■□□□□ 0.54
USP6P35125 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC18.41■□□□□ 0.54
USP6P35125 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC18.41■□□□□ 0.54
USP6P35125 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC18.41■□□□□ 0.54
USP6P35125 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC18.41■□□□□ 0.54
USP6P35125 MDC1-209ENST00000613547 830 ntTSL 5 BASIC18.41■□□□□ 0.54
USP6P35125 AC008622.3-201ENST00000621170 600 ntBASIC18.41■□□□□ 0.54
USP6P35125 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP6P35125 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP6P35125 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP6P35125 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP6P35125 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP6P35125 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP6P35125 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.41■□□□□ 0.54
USP6P35125 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP6P35125 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP6P35125 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP6P35125 AC005089.1-201ENST00000619486 2241 ntBASIC18.41■□□□□ 0.54
USP6P35125 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
USP6P35125 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 DNM1P46-202ENST00000415963 882 ntBASIC18.4■□□□□ 0.54
USP6P35125 MARK2P9-201ENST00000430958 1727 ntBASIC18.4■□□□□ 0.54
USP6P35125 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC18.4■□□□□ 0.54
USP6P35125 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC18.4■□□□□ 0.54
USP6P35125 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC18.4■□□□□ 0.54
USP6P35125 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC18.4■□□□□ 0.54
USP6P35125 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC18.4■□□□□ 0.54
USP6P35125 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC18.4■□□□□ 0.54
USP6P35125 AC006986.1-201ENST00000612764 241 ntBASIC18.4■□□□□ 0.54
USP6P35125 AC110057.1-201ENST00000636031 898 ntBASIC18.4■□□□□ 0.54
USP6P35125 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 AGAP10P-201ENST00000454844 2418 ntBASIC18.4■□□□□ 0.54
USP6P35125 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.4■□□□□ 0.54
USP6P35125 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
USP6P35125 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
USP6P35125 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
USP6P35125 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 KRT8P24-201ENST00000560290 1559 ntBASIC18.4■□□□□ 0.54
USP6P35125 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC18.4■□□□□ 0.54
USP6P35125 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 RBP4-203ENST00000371469 814 ntTSL 5 BASIC18.4■□□□□ 0.54
USP6P35125 MIR611-201ENST00000384869 67 ntBASIC18.4■□□□□ 0.54
USP6P35125 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC18.4■□□□□ 0.54
USP6P35125 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 HNRNPA1P42-201ENST00000458678 957 ntBASIC18.4■□□□□ 0.54
USP6P35125 AC092910.2-201ENST00000491262 348 ntBASIC18.4■□□□□ 0.54
USP6P35125 AC114812.4-201ENST00000506676 757 ntBASIC18.4■□□□□ 0.54
USP6P35125 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC18.4■□□□□ 0.54
USP6P35125 RN7SL480P-201ENST00000581481 294 ntBASIC18.4■□□□□ 0.54
USP6P35125 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC18.4■□□□□ 0.54
USP6P35125 AC211476.2-201ENST00000608799 708 ntBASIC18.4■□□□□ 0.54
USP6P35125 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6P35125 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.4■□□□□ 0.54
USP6P35125 AL050341.2-201ENST00000567508 1541 ntBASIC18.39■□□□□ 0.54
USP6P35125 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
USP6P35125 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
USP6P35125 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
USP6P35125 EML1-203ENST00000334192 4064 ntTSL 5 BASIC18.39■□□□□ 0.53
USP6P35125 USP28-214ENST00000545540 3431 ntTSL 2 BASIC18.39■□□□□ 0.53
USP6P35125 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP6P35125 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC18.39■□□□□ 0.53
USP6P35125 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
USP6P35125 AP002414.2-201ENST00000591780 3365 ntBASIC18.39■□□□□ 0.53
USP6P35125 AC111170.3-201ENST00000624282 2464 ntBASIC18.39■□□□□ 0.53
USP6P35125 AC007191.1-201ENST00000623179 2995 ntBASIC18.39■□□□□ 0.53
USP6P35125 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC18.39■□□□□ 0.53
USP6P35125 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP6P35125 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
USP6P35125 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
USP6P35125 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
USP6P35125 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC18.39■□□□□ 0.53
USP6P35125 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms