Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC11.88□□□□□ -0.51
COL8A2P25067 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 PYY2-201ENST00000315776 282 ntBASIC11.88□□□□□ -0.51
COL8A2P25067 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
COL8A2P25067 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC11.88□□□□□ -0.51
COL8A2P25067 AC098934.1-203ENST00000442868 1262 ntBASIC11.88□□□□□ -0.51
COL8A2P25067 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC11.88□□□□□ -0.51
COL8A2P25067 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 AP003398.1-201ENST00000531124 318 ntBASIC11.88□□□□□ -0.51
COL8A2P25067 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC11.88□□□□□ -0.51
COL8A2P25067 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
COL8A2P25067 NAA40-205ENST00000539656 577 ntTSL 4 BASIC11.88□□□□□ -0.51
COL8A2P25067 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC11.88□□□□□ -0.51
COL8A2P25067 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
COL8A2P25067 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC11.88□□□□□ -0.51
COL8A2P25067 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
COL8A2P25067 RN7SL470P-201ENST00000583069 259 ntBASIC11.88□□□□□ -0.51
COL8A2P25067 AC007250.1-201ENST00000608934 338 ntBASIC11.88□□□□□ -0.51
COL8A2P25067 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC11.88□□□□□ -0.51
COL8A2P25067 AL161773.1-201ENST00000624845 863 ntBASIC11.88□□□□□ -0.51
COL8A2P25067 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.88□□□□□ -0.51
COL8A2P25067 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC11.88□□□□□ -0.51
COL8A2P25067 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC11.88□□□□□ -0.51
COL8A2P25067 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.88□□□□□ -0.51
COL8A2P25067 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
COL8A2P25067 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.88□□□□□ -0.51
COL8A2P25067 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.88□□□□□ -0.51
COL8A2P25067 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.88□□□□□ -0.51
COL8A2P25067 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
COL8A2P25067 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
COL8A2P25067 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
COL8A2P25067 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
COL8A2P25067 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 KRT8P18-201ENST00000413425 1445 ntBASIC11.87□□□□□ -0.51
COL8A2P25067 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
COL8A2P25067 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.87□□□□□ -0.51
COL8A2P25067 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.87□□□□□ -0.51
COL8A2P25067 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC11.87□□□□□ -0.51
COL8A2P25067 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 RN7SKP109-201ENST00000410592 316 ntBASIC11.87□□□□□ -0.51
COL8A2P25067 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
COL8A2P25067 PFN2-202ENST00000423691 911 ntTSL 2 BASIC11.87□□□□□ -0.51
COL8A2P25067 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC11.87□□□□□ -0.51
COL8A2P25067 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC11.87□□□□□ -0.51
COL8A2P25067 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC11.87□□□□□ -0.51
COL8A2P25067 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC11.87□□□□□ -0.51
COL8A2P25067 RN7SL788P-201ENST00000460504 316 ntBASIC11.87□□□□□ -0.51
COL8A2P25067 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC11.87□□□□□ -0.51
COL8A2P25067 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC11.87□□□□□ -0.51
COL8A2P25067 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC11.87□□□□□ -0.51
COL8A2P25067 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC11.87□□□□□ -0.51
COL8A2P25067 TMCO5B-205ENST00000530020 894 ntBASIC11.87□□□□□ -0.51
COL8A2P25067 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC11.87□□□□□ -0.51
COL8A2P25067 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC11.87□□□□□ -0.51
COL8A2P25067 NUDT4P2-201ENST00000578341 546 ntBASIC11.87□□□□□ -0.51
COL8A2P25067 MIR4649-201ENST00000582839 64 ntBASIC11.87□□□□□ -0.51
COL8A2P25067 AC005041.3-201ENST00000606287 649 ntBASIC11.87□□□□□ -0.51
COL8A2P25067 WT1-AS_6.1-201ENST00000614919 121 ntBASIC11.87□□□□□ -0.51
COL8A2P25067 MIR6727-201ENST00000620702 65 ntBASIC11.87□□□□□ -0.51
COL8A2P25067 AC073911.3-201ENST00000624401 631 ntBASIC11.87□□□□□ -0.51
COL8A2P25067 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC11.87□□□□□ -0.51
COL8A2P25067 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
COL8A2P25067 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.87□□□□□ -0.51
COL8A2P25067 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.87□□□□□ -0.51
COL8A2P25067 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.87□□□□□ -0.51
COL8A2P25067 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms