Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.44□□□□□ -0.1
ERCC2P18074 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.44□□□□□ -0.1
ERCC2P18074 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.44□□□□□ -0.1
ERCC2P18074 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.44□□□□□ -0.1
ERCC2P18074 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.44□□□□□ -0.1
ERCC2P18074 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
ERCC2P18074 AC015967.2-201ENST00000624092 234 ntBASIC14.44□□□□□ -0.1
ERCC2P18074 AC006435.4-201ENST00000625037 234 ntBASIC14.44□□□□□ -0.1
ERCC2P18074 SNORA50.1-201ENST00000628590 135 ntBASIC14.44□□□□□ -0.1
ERCC2P18074 AL356737.1-201ENST00000634391 234 ntBASIC14.44□□□□□ -0.1
ERCC2P18074 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.44□□□□□ -0.1
ERCC2P18074 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 FAM90A2P-201ENST00000511144 1395 ntBASIC14.44□□□□□ -0.1
ERCC2P18074 FAM90A25P-201ENST00000528404 1395 ntBASIC14.44□□□□□ -0.1
ERCC2P18074 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ERCC2P18074 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ERCC2P18074 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ERCC2P18074 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
ERCC2P18074 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ERCC2P18074 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.43□□□□□ -0.1
ERCC2P18074 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 KRT8P18-201ENST00000413425 1445 ntBASIC14.43□□□□□ -0.1
ERCC2P18074 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.43□□□□□ -0.1
ERCC2P18074 MEX3B-202ENST00000558133 4333 ntBASIC14.43□□□□□ -0.1
ERCC2P18074 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
ERCC2P18074 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 MIR557-201ENST00000385239 98 ntBASIC14.43□□□□□ -0.1
ERCC2P18074 AL583805.1-201ENST00000391389 531 ntBASIC14.43□□□□□ -0.1
ERCC2P18074 AL391647.1-201ENST00000395664 511 ntBASIC14.43□□□□□ -0.1
ERCC2P18074 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ERCC2P18074 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.43□□□□□ -0.1
ERCC2P18074 AL133466.1-201ENST00000447582 150 ntBASIC14.43□□□□□ -0.1
ERCC2P18074 AP000358.1-201ENST00000456260 156 ntBASIC14.43□□□□□ -0.1
ERCC2P18074 RN7SL67P-201ENST00000492147 296 ntBASIC14.43□□□□□ -0.1
ERCC2P18074 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.43□□□□□ -0.1
ERCC2P18074 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.43□□□□□ -0.1
ERCC2P18074 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.43□□□□□ -0.1
ERCC2P18074 KLF17P1-201ENST00000547105 1126 ntBASIC14.43□□□□□ -0.1
ERCC2P18074 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.43□□□□□ -0.1
ERCC2P18074 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.43□□□□□ -0.1
ERCC2P18074 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.43□□□□□ -0.1
ERCC2P18074 MIR3677-201ENST00000578964 60 ntBASIC14.43□□□□□ -0.1
ERCC2P18074 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 CU633904.3-201ENST00000624042 1029 ntBASIC14.43□□□□□ -0.1
ERCC2P18074 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.43□□□□□ -0.1
ERCC2P18074 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.43□□□□□ -0.1
ERCC2P18074 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.43□□□□□ -0.1
ERCC2P18074 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.43□□□□□ -0.1
ERCC2P18074 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 CR383656.2-201ENST00000548656 2254 ntBASIC14.43□□□□□ -0.1
ERCC2P18074 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ERCC2P18074 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ERCC2P18074 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ERCC2P18074 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ERCC2P18074 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ERCC2P18074 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.42□□□□□ -0.1
ERCC2P18074 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ERCC2P18074 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ERCC2P18074 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ERCC2P18074 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ERCC2P18074 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ERCC2P18074 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.42□□□□□ -0.1
ERCC2P18074 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.42□□□□□ -0.1
ERCC2P18074 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ERCC2P18074 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ERCC2P18074 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
ERCC2P18074 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
ERCC2P18074 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.42□□□□□ -0.1
ERCC2P18074 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
ERCC2P18074 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms