Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN2P17655 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN2P17655 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN2P17655 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC16.29■□□□□ 0.2
CAPN2P17655 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN2P17655 AC026470.1-201ENST00000478038 846 ntBASIC16.29■□□□□ 0.2
CAPN2P17655 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.29■□□□□ 0.2
CAPN2P17655 RN7SL357P-201ENST00000581065 298 ntBASIC16.29■□□□□ 0.2
CAPN2P17655 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CAPN2P17655 SIGLEC22P-201ENST00000599104 714 ntBASIC16.29■□□□□ 0.2
CAPN2P17655 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.29■□□□□ 0.2
CAPN2P17655 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CAPN2P17655 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN2P17655 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN2P17655 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN2P17655 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN2P17655 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CAPN2P17655 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN2P17655 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CAPN2P17655 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN2P17655 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN2P17655 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN2P17655 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN2P17655 AC092135.3-201ENST00000624151 1846 ntBASIC16.29■□□□□ 0.2
CAPN2P17655 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CAPN2P17655 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CAPN2P17655 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC16.28■□□□□ 0.2
CAPN2P17655 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CAPN2P17655 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPN2P17655 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CAPN2P17655 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CAPN2P17655 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 UROS-201ENST00000368774 744 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPN2P17655 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPN2P17655 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.28■□□□□ 0.2
CAPN2P17655 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPN2P17655 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPN2P17655 AC093909.3-201ENST00000504783 336 ntBASIC16.28■□□□□ 0.2
CAPN2P17655 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC16.28■□□□□ 0.2
CAPN2P17655 AC068867.1-201ENST00000559855 150 ntBASIC16.28■□□□□ 0.2
CAPN2P17655 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPN2P17655 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPN2P17655 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CAPN2P17655 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CAPN2P17655 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CAPN2P17655 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPN2P17655 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC16.28■□□□□ 0.2
CAPN2P17655 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN2P17655 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CAPN2P17655 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CAPN2P17655 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CAPN2P17655 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN2P17655 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN2P17655 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.27■□□□□ 0.2
CAPN2P17655 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN2P17655 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN2P17655 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CAPN2P17655 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN2P17655 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN2P17655 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CAPN2P17655 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.27■□□□□ 0.2
CAPN2P17655 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN2P17655 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CAPN2P17655 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN2P17655 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN2P17655 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN2P17655 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CAPN2P17655 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN2P17655 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CAPN2P17655 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN2P17655 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC16.27■□□□□ 0.2
CAPN2P17655 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN2P17655 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.27■□□□□ 0.2
CAPN2P17655 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CAPN2P17655 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN2P17655 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC16.27■□□□□ 0.2
CAPN2P17655 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CAPN2P17655 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.27■□□□□ 0.19
CAPN2P17655 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CAPN2P17655 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CAPN2P17655 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
CAPN2P17655 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CAPN2P17655 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms