Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 KRT18P15-201ENST00000458108 1291 ntBASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 AC233724.9-201ENST00000511694 407 ntBASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 CDC37P2-201ENST00000562287 1029 ntBASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 RN7SL300P-201ENST00000582522 318 ntBASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 UGT1A12P-201ENST00000447084 853 ntBASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 AC104212.2-201ENST00000478813 628 ntBASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 CETN3-205ENST00000522842 664 ntTSL 2 BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 OR4A49P-201ENST00000527050 632 ntBASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC16.75■□□□□ 0.27
ZC3H4Q9UPT8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 ACTG1P23-201ENST00000437653 1074 ntBASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 AC092865.2-201ENST00000439409 971 ntBASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 AC113398.1-201ENST00000464124 406 ntBASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 PCTP-206ENST00000573500 919 ntTSL 3 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 MIR5091-201ENST00000578707 93 ntBASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 CCND3P2-201ENST00000579393 537 ntBASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 EMP3-204ENST00000596315 761 ntTSL 2 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 AL031768.1-201ENST00000606542 701 ntBASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 MIR6074-201ENST00000612054 107 ntBASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms