Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.17□□□□□ -0.3
LYRM4Q9HD34 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.17□□□□□ -0.3
LYRM4Q9HD34 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.17□□□□□ -0.3
LYRM4Q9HD34 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.17□□□□□ -0.3
LYRM4Q9HD34 MIR3940-201ENST00000579148 102 ntBASIC13.17□□□□□ -0.3
LYRM4Q9HD34 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.17□□□□□ -0.3
LYRM4Q9HD34 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.17□□□□□ -0.3
LYRM4Q9HD34 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYRM4Q9HD34 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYRM4Q9HD34 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LYRM4Q9HD34 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYRM4Q9HD34 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYRM4Q9HD34 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYRM4Q9HD34 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYRM4Q9HD34 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYRM4Q9HD34 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYRM4Q9HD34 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 ERP29P1-201ENST00000442902 706 ntBASIC13.16□□□□□ -0.3
LYRM4Q9HD34 GRPEL2P1-201ENST00000453145 339 ntBASIC13.16□□□□□ -0.3
LYRM4Q9HD34 CHCHD2P9-201ENST00000461726 456 ntBASIC13.16□□□□□ -0.3
LYRM4Q9HD34 RN7SL767P-201ENST00000493013 295 ntBASIC13.16□□□□□ -0.3
LYRM4Q9HD34 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 MIR3907-201ENST00000579424 151 ntBASIC13.16□□□□□ -0.3
LYRM4Q9HD34 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 AP005264.5-201ENST00000590066 467 ntBASIC13.16□□□□□ -0.3
LYRM4Q9HD34 AL133499.1-201ENST00000596207 608 ntBASIC13.16□□□□□ -0.3
LYRM4Q9HD34 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 PES1P2-201ENST00000449745 1735 ntBASIC13.16□□□□□ -0.3
LYRM4Q9HD34 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYRM4Q9HD34 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 PDXDC2P-206ENST00000534700 1315 ntBASIC13.15□□□□□ -0.3
LYRM4Q9HD34 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 AC135782.3-201ENST00000562782 2105 ntBASIC13.15□□□□□ -0.3
LYRM4Q9HD34 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 PYY2-201ENST00000315776 282 ntBASIC13.15□□□□□ -0.3
LYRM4Q9HD34 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
LYRM4Q9HD34 MIR1307-201ENST00000408840 149 ntBASIC13.15□□□□□ -0.3
LYRM4Q9HD34 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.15□□□□□ -0.3
LYRM4Q9HD34 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms