Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.26□□□□□ -0.45
CCDC107Q8WV48 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 AC098614.1-201ENST00000368528 745 ntBASIC12.26□□□□□ -0.45
CCDC107Q8WV48 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 RN7SKP175-201ENST00000408472 289 ntBASIC12.26□□□□□ -0.45
CCDC107Q8WV48 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 AC007389.4-201ENST00000454674 793 ntBASIC12.26□□□□□ -0.45
CCDC107Q8WV48 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 SLC25A47P1-201ENST00000531577 414 ntBASIC12.26□□□□□ -0.45
CCDC107Q8WV48 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 AC025279.2-201ENST00000569730 653 ntBASIC12.26□□□□□ -0.45
CCDC107Q8WV48 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 AC027307.3-201ENST00000594262 1100 ntBASIC12.26□□□□□ -0.45
CCDC107Q8WV48 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 BX088702.1-201ENST00000610784 235 ntBASIC12.26□□□□□ -0.45
CCDC107Q8WV48 BAP1-211ENST00000615113 489 ntBASIC12.26□□□□□ -0.45
CCDC107Q8WV48 AP001002.3-201ENST00000623482 206 ntBASIC12.26□□□□□ -0.45
CCDC107Q8WV48 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 LINC00567-201ENST00000569854 3409 ntBASIC12.26□□□□□ -0.45
CCDC107Q8WV48 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 CICP1-201ENST00000416803 2410 ntBASIC12.26□□□□□ -0.45
CCDC107Q8WV48 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 LINC02486-201ENST00000604157 3000 ntBASIC12.25□□□□□ -0.45
CCDC107Q8WV48 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 FAM8A4P-201ENST00000435433 1213 ntBASIC12.25□□□□□ -0.45
CCDC107Q8WV48 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 PUDPP3-201ENST00000445368 636 ntBASIC12.25□□□□□ -0.45
CCDC107Q8WV48 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 AC106820.3-201ENST00000561653 397 ntBASIC12.25□□□□□ -0.45
CCDC107Q8WV48 GNRHR2-203ENST00000581100 1187 ntBASIC12.25□□□□□ -0.45
CCDC107Q8WV48 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 AC132938.4-201ENST00000623835 848 ntBASIC12.25□□□□□ -0.45
CCDC107Q8WV48 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 AP000593.2-201ENST00000542775 1433 ntBASIC12.25□□□□□ -0.45
CCDC107Q8WV48 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms