Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 AC055876.3-201ENST00000431496 288 ntBASIC12.22□□□□□ -0.45
BEST4Q8NFU0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 AC092552.1-201ENST00000547243 906 ntBASIC12.22□□□□□ -0.45
BEST4Q8NFU0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 AC104506.1-201ENST00000609247 429 ntBASIC12.22□□□□□ -0.45
BEST4Q8NFU0 AC138649.4-201ENST00000612222 287 ntBASIC12.22□□□□□ -0.45
BEST4Q8NFU0 AC138466.3-201ENST00000619983 221 ntBASIC12.22□□□□□ -0.45
BEST4Q8NFU0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 SLC7A15P-201ENST00000424028 1363 ntBASIC12.21□□□□□ -0.45
BEST4Q8NFU0 KRT8P28-201ENST00000433288 1390 ntBASIC12.21□□□□□ -0.45
BEST4Q8NFU0 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 MYCLP2-201ENST00000449268 967 ntBASIC12.21□□□□□ -0.45
BEST4Q8NFU0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 FTLP10-202ENST00000505798 471 ntBASIC12.21□□□□□ -0.45
BEST4Q8NFU0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.21□□□□□ -0.45
BEST4Q8NFU0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.21□□□□□ -0.46
BEST4Q8NFU0 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms