Protein–RNA interactions for Protein: Q8IYA6

CKAP2L, Cytoskeleton-associated protein 2-like, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2LQ8IYA6 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2LQ8IYA6 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2LQ8IYA6 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2LQ8IYA6 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2LQ8IYA6 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2LQ8IYA6 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2LQ8IYA6 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC16.4■□□□□ 0.22
CKAP2LQ8IYA6 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CKAP2LQ8IYA6 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CKAP2LQ8IYA6 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
CKAP2LQ8IYA6 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 AL645933.1-201ENST00000440087 609 ntBASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 HLA-J-204ENST00000495278 958 ntBASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 AC125604.1-201ENST00000496255 707 ntBASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 AC005586.2-201ENST00000563946 837 ntBASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 RN7SL774P-201ENST00000577467 290 ntBASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 AC104506.1-201ENST00000609247 429 ntBASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2LQ8IYA6 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 AL662890.1-201ENST00000396818 632 ntBASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 AP001505.2-201ENST00000616815 443 ntBASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 AC125807.2-201ENST00000513358 3514 ntBASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2LQ8IYA6 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms