Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AP000812.2-201ENST00000538934 718 ntBASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 AC023310.1-201ENST00000554836 735 ntBASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 AC239800.4-201ENST00000603712 296 ntBASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 AC011840.2-201ENST00000563063 1520 ntBASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 DDO-201ENST00000368923 1953 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 MIR1202-201ENST00000408529 83 ntBASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 U91328.1-201ENST00000437528 223 ntBASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 ACA64.2-201ENST00000459014 129 ntBASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 AL391280.1-201ENST00000506969 1062 ntBASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 AC106820.3-201ENST00000561653 397 ntBASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 AP000593.2-201ENST00000542775 1433 ntBASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 CICP18-201ENST00000406017 2812 ntBASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.03□□□□□ -0.32
TMEM53Q6P2H8 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TMEM53Q6P2H8 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
TMEM53Q6P2H8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.02□□□□□ -0.32
TMEM53Q6P2H8 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TMEM53Q6P2H8 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TMEM53Q6P2H8 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TMEM53Q6P2H8 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms