Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CACNA1BQ00975 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CACNA1BQ00975 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.82□□□□□ -0.36
CACNA1BQ00975 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC12.82□□□□□ -0.36
CACNA1BQ00975 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC12.82□□□□□ -0.36
CACNA1BQ00975 YBX1P3-201ENST00000468366 909 ntBASIC12.82□□□□□ -0.36
CACNA1BQ00975 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CACNA1BQ00975 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC12.82□□□□□ -0.36
CACNA1BQ00975 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC12.82□□□□□ -0.36
CACNA1BQ00975 AC092535.4-201ENST00000609548 397 ntBASIC12.82□□□□□ -0.36
CACNA1BQ00975 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CACNA1BQ00975 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.82□□□□□ -0.36
CACNA1BQ00975 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.81□□□□□ -0.36
CACNA1BQ00975 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 TFAM-201ENST00000373895 973 ntTSL 2 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 C3orf18-202ENST00000422619 551 ntTSL 4 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 AP000346.2-201ENST00000430707 906 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 PGK1P2-201ENST00000431702 1214 ntBASIC12.81□□□□□ -0.36
CACNA1BQ00975 AC006372.1-201ENST00000449903 546 ntTSL 2 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 TMEM255B-205ENST00000488362 694 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 AL596094.1-201ENST00000608273 276 ntTSL 2 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 AC009779.7-201ENST00000609031 469 ntBASIC12.81□□□□□ -0.36
CACNA1BQ00975 MIR7847-201ENST00000610912 103 ntBASIC12.81□□□□□ -0.36
CACNA1BQ00975 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.81□□□□□ -0.36
CACNA1BQ00975 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 RN7SL832P-201ENST00000607781 1756 ntBASIC12.81□□□□□ -0.36
CACNA1BQ00975 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.81□□□□□ -0.36
CACNA1BQ00975 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CACNA1BQ00975 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 AC015818.1-201ENST00000451011 244 ntBASIC12.8□□□□□ -0.36
CACNA1BQ00975 RPL18P1-201ENST00000497218 552 ntBASIC12.8□□□□□ -0.36
CACNA1BQ00975 LYRM7-203ENST00000510516 604 ntTSL 2 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 AC002351.1-201ENST00000546852 590 ntTSL 2 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 CCND3P2-201ENST00000579393 537 ntBASIC12.8□□□□□ -0.36
CACNA1BQ00975 AC245884.8-201ENST00000599382 880 ntBASIC12.8□□□□□ -0.36
CACNA1BQ00975 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms