Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.82■□□□□ 0.12
CCNA1P78396 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCNA1P78396 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.82■□□□□ 0.12
CCNA1P78396 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.82■□□□□ 0.12
CCNA1P78396 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.82■□□□□ 0.12
CCNA1P78396 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.82■□□□□ 0.12
CCNA1P78396 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA1P78396 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA1P78396 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA1P78396 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA1P78396 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA1P78396 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCNA1P78396 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.81■□□□□ 0.12
CCNA1P78396 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCNA1P78396 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA1P78396 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA1P78396 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA1P78396 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA1P78396 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA1P78396 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CCNA1P78396 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CCNA1P78396 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCNA1P78396 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.81■□□□□ 0.12
CCNA1P78396 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.81■□□□□ 0.12
CCNA1P78396 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA1P78396 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.81■□□□□ 0.12
CCNA1P78396 RPSAP12-201ENST00000435879 888 ntBASIC15.81■□□□□ 0.12
CCNA1P78396 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA1P78396 AC025594.1-201ENST00000469533 543 ntBASIC15.81■□□□□ 0.12
CCNA1P78396 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC15.81■□□□□ 0.12
CCNA1P78396 AC092612.1-201ENST00000514501 998 ntBASIC15.81■□□□□ 0.12
CCNA1P78396 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC15.81■□□□□ 0.12
CCNA1P78396 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC15.81■□□□□ 0.12
CCNA1P78396 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.81■□□□□ 0.12
CCNA1P78396 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC15.81■□□□□ 0.12
CCNA1P78396 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC15.81■□□□□ 0.12
CCNA1P78396 AC015802.1-201ENST00000588104 1449 ntBASIC15.81■□□□□ 0.12
CCNA1P78396 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC15.81■□□□□ 0.12
CCNA1P78396 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA1P78396 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA1P78396 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA1P78396 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CCNA1P78396 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.81■□□□□ 0.12
CCNA1P78396 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA1P78396 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CCNA1P78396 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA1P78396 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.8■□□□□ 0.12
CCNA1P78396 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCNA1P78396 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA1P78396 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA1P78396 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA1P78396 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CCNA1P78396 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA1P78396 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCNA1P78396 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCNA1P78396 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA1P78396 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCNA1P78396 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA1P78396 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
CCNA1P78396 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.8■□□□□ 0.12
CCNA1P78396 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.8■□□□□ 0.12
CCNA1P78396 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC15.8■□□□□ 0.12
CCNA1P78396 UROS-201ENST00000368774 744 ntTSL 2 BASIC15.8■□□□□ 0.12
CCNA1P78396 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA1P78396 HLA-DMA-202ENST00000395303 1007 ntBASIC15.8■□□□□ 0.12
CCNA1P78396 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA1P78396 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC15.8■□□□□ 0.12
CCNA1P78396 AL137244.1-201ENST00000422931 865 ntBASIC15.8■□□□□ 0.12
CCNA1P78396 AC092810.2-201ENST00000431570 362 ntBASIC15.8■□□□□ 0.12
CCNA1P78396 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC15.8■□□□□ 0.12
CCNA1P78396 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC15.8■□□□□ 0.12
CCNA1P78396 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC15.8■□□□□ 0.12
CCNA1P78396 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC15.8■□□□□ 0.12
CCNA1P78396 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC15.8■□□□□ 0.12
CCNA1P78396 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC15.8■□□□□ 0.12
CCNA1P78396 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA1P78396 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA1P78396 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA1P78396 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.8■□□□□ 0.12
CCNA1P78396 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA1P78396 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA1P78396 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA1P78396 GUCY2EP-203ENST00000531117 1918 ntBASIC15.8■□□□□ 0.12
CCNA1P78396 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA1P78396 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA1P78396 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.8■□□□□ 0.12
CCNA1P78396 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.8■□□□□ 0.12
CCNA1P78396 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCNA1P78396 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA1P78396 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms