Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
UBA52P62987 AC135782.3-201ENST00000562782 2105 ntBASIC12.28□□□□□ -0.44
UBA52P62987 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.28□□□□□ -0.44
UBA52P62987 AC092053.3-201ENST00000641308 4975 ntBASIC12.28□□□□□ -0.44
UBA52P62987 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
UBA52P62987 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBA52P62987 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBA52P62987 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
UBA52P62987 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBA52P62987 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBA52P62987 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
UBA52P62987 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
UBA52P62987 Z98257.2-202ENST00000641138 1548 ntBASIC12.27□□□□□ -0.44
UBA52P62987 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBA52P62987 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.27□□□□□ -0.44
UBA52P62987 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.27□□□□□ -0.44
UBA52P62987 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
UBA52P62987 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
UBA52P62987 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBA52P62987 PTPRVP-205ENST00000641549 5067 ntBASIC12.27□□□□□ -0.44
UBA52P62987 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBA52P62987 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.27□□□□□ -0.44
UBA52P62987 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBA52P62987 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.27□□□□□ -0.44
UBA52P62987 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.27□□□□□ -0.44
UBA52P62987 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBA52P62987 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
UBA52P62987 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.27□□□□□ -0.45
UBA52P62987 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.27□□□□□ -0.45
UBA52P62987 MIR663B-201ENST00000408361 115 ntBASIC12.27□□□□□ -0.45
UBA52P62987 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.27□□□□□ -0.45
UBA52P62987 POM121L10P-201ENST00000436994 1285 ntBASIC12.27□□□□□ -0.45
UBA52P62987 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.27□□□□□ -0.45
UBA52P62987 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.27□□□□□ -0.45
UBA52P62987 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.27□□□□□ -0.45
UBA52P62987 CNN2P10-201ENST00000443067 918 ntBASIC12.27□□□□□ -0.45
UBA52P62987 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
UBA52P62987 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.27□□□□□ -0.45
UBA52P62987 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.27□□□□□ -0.45
UBA52P62987 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.27□□□□□ -0.45
UBA52P62987 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC12.27□□□□□ -0.45
UBA52P62987 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.27□□□□□ -0.45
UBA52P62987 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.27□□□□□ -0.45
UBA52P62987 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.27□□□□□ -0.45
UBA52P62987 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.27□□□□□ -0.45
UBA52P62987 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.27□□□□□ -0.45
UBA52P62987 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC12.27□□□□□ -0.45
UBA52P62987 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.27□□□□□ -0.45
UBA52P62987 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.27□□□□□ -0.45
UBA52P62987 RN7SL832P-201ENST00000607781 1756 ntBASIC12.27□□□□□ -0.45
UBA52P62987 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
UBA52P62987 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
UBA52P62987 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.27□□□□□ -0.45
UBA52P62987 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.27□□□□□ -0.45
UBA52P62987 AGAP10P-201ENST00000454844 2418 ntBASIC12.27□□□□□ -0.45
UBA52P62987 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
UBA52P62987 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
UBA52P62987 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.27□□□□□ -0.45
UBA52P62987 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.27□□□□□ -0.45
UBA52P62987 LRRC59-203ENST00000576448 1531 ntBASIC12.27□□□□□ -0.45
UBA52P62987 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBA52P62987 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
UBA52P62987 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
UBA52P62987 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
UBA52P62987 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.26□□□□□ -0.45
UBA52P62987 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.26□□□□□ -0.45
UBA52P62987 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.26□□□□□ -0.45
UBA52P62987 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.26□□□□□ -0.45
UBA52P62987 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
UBA52P62987 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms