Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC14.59□□□□□ -0.07
ERVFC1P60507 AC004522.1-201ENST00000419978 654 ntBASIC14.59□□□□□ -0.07
ERVFC1P60507 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC14.59□□□□□ -0.07
ERVFC1P60507 RPL18AP16-201ENST00000424057 531 ntBASIC14.59□□□□□ -0.07
ERVFC1P60507 AC147876.1-201ENST00000504408 322 ntBASIC14.59□□□□□ -0.07
ERVFC1P60507 AC112250.1-201ENST00000504640 745 ntBASIC14.59□□□□□ -0.07
ERVFC1P60507 ACY3-202ENST00000529256 933 ntTSL 3 BASIC14.59□□□□□ -0.07
ERVFC1P60507 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC14.59□□□□□ -0.07
ERVFC1P60507 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC14.59□□□□□ -0.07
ERVFC1P60507 RN7SL602P-201ENST00000578326 324 ntBASIC14.59□□□□□ -0.07
ERVFC1P60507 RN7SL718P-201ENST00000581254 303 ntBASIC14.59□□□□□ -0.07
ERVFC1P60507 NEK4P3-201ENST00000604859 544 ntBASIC14.59□□□□□ -0.07
ERVFC1P60507 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC14.59□□□□□ -0.07
ERVFC1P60507 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERVFC1P60507 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC14.59□□□□□ -0.07
ERVFC1P60507 AL139424.3-202ENST00000641619 917 ntBASIC14.59□□□□□ -0.07
ERVFC1P60507 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERVFC1P60507 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ERVFC1P60507 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.59□□□□□ -0.07
ERVFC1P60507 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.59□□□□□ -0.07
ERVFC1P60507 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
ERVFC1P60507 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERVFC1P60507 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.59□□□□□ -0.07
ERVFC1P60507 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERVFC1P60507 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERVFC1P60507 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERVFC1P60507 WASH7P-201ENST00000488147 1351 ntBASIC14.59□□□□□ -0.07
ERVFC1P60507 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.59□□□□□ -0.07
ERVFC1P60507 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ERVFC1P60507 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERVFC1P60507 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERVFC1P60507 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.58□□□□□ -0.07
ERVFC1P60507 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ERVFC1P60507 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ERVFC1P60507 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ERVFC1P60507 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
ERVFC1P60507 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
ERVFC1P60507 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ERVFC1P60507 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
ERVFC1P60507 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ERVFC1P60507 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ERVFC1P60507 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ERVFC1P60507 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ERVFC1P60507 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ERVFC1P60507 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
ERVFC1P60507 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ERVFC1P60507 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 NQO2-204ENST00000380454 851 ntTSL 2 BASIC14.58□□□□□ -0.08
ERVFC1P60507 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 HIST1H2APS2-201ENST00000454426 370 ntBASIC14.58□□□□□ -0.08
ERVFC1P60507 HNRNPA3P6-201ENST00000472163 1006 ntBASIC14.58□□□□□ -0.08
ERVFC1P60507 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC14.58□□□□□ -0.08
ERVFC1P60507 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC14.58□□□□□ -0.08
ERVFC1P60507 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.58□□□□□ -0.08
ERVFC1P60507 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ERVFC1P60507 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 AC064850.1-201ENST00000413279 1398 ntBASIC14.58□□□□□ -0.08
ERVFC1P60507 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.58□□□□□ -0.08
ERVFC1P60507 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ERVFC1P60507 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERVFC1P60507 AC015802.1-201ENST00000588104 1449 ntBASIC14.58□□□□□ -0.08
ERVFC1P60507 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ERVFC1P60507 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ERVFC1P60507 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ERVFC1P60507 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ERVFC1P60507 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERVFC1P60507 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERVFC1P60507 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERVFC1P60507 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERVFC1P60507 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ERVFC1P60507 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERVFC1P60507 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ERVFC1P60507 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC14.57□□□□□ -0.08
ERVFC1P60507 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC14.57□□□□□ -0.08
ERVFC1P60507 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ERVFC1P60507 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
ERVFC1P60507 OR7E155P-201ENST00000412208 1014 ntBASIC14.57□□□□□ -0.08
ERVFC1P60507 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC14.57□□□□□ -0.08
ERVFC1P60507 RNU1-80P-201ENST00000459500 161 ntBASIC14.57□□□□□ -0.08
ERVFC1P60507 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC14.57□□□□□ -0.08
ERVFC1P60507 PHF23-213ENST00000613632 850 ntTSL 5 BASIC14.57□□□□□ -0.08
ERVFC1P60507 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERVFC1P60507 MEP1AP1-201ENST00000636082 1097 ntBASIC14.57□□□□□ -0.08
ERVFC1P60507 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ERVFC1P60507 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERVFC1P60507 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms