Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN6P56747 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC13.46□□□□□ -0.25
CLDN6P56747 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
CLDN6P56747 AC091304.3-201ENST00000566500 716 ntBASIC13.46□□□□□ -0.25
CLDN6P56747 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC13.46□□□□□ -0.25
CLDN6P56747 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
CLDN6P56747 GGNBP1-204ENST00000613113 887 ntBASIC13.46□□□□□ -0.25
CLDN6P56747 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC13.46□□□□□ -0.25
CLDN6P56747 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN6P56747 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.46□□□□□ -0.25
CLDN6P56747 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC13.46□□□□□ -0.25
CLDN6P56747 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CLDN6P56747 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN6P56747 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CLDN6P56747 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.46□□□□□ -0.25
CLDN6P56747 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CLDN6P56747 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.46□□□□□ -0.25
CLDN6P56747 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN6P56747 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN6P56747 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN6P56747 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN6P56747 AC007191.1-201ENST00000623179 2995 ntBASIC13.46□□□□□ -0.26
CLDN6P56747 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN6P56747 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN6P56747 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN6P56747 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN6P56747 AC139749.1-202ENST00000617529 3139 ntBASIC13.46□□□□□ -0.26
CLDN6P56747 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN6P56747 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN6P56747 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
CLDN6P56747 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN6P56747 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 TBC1D27-202ENST00000424239 1573 ntBASIC13.45□□□□□ -0.26
CLDN6P56747 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.45□□□□□ -0.26
CLDN6P56747 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CLDN6P56747 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CLDN6P56747 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CLDN6P56747 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN6P56747 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 CICP14-201ENST00000629111 2732 ntBASIC13.45□□□□□ -0.26
CLDN6P56747 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CLDN6P56747 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN6P56747 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CLDN6P56747 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN6P56747 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.45□□□□□ -0.26
CLDN6P56747 AP000244.1-201ENST00000424582 201 ntBASIC13.45□□□□□ -0.26
CLDN6P56747 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC13.45□□□□□ -0.26
CLDN6P56747 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN6P56747 CDCA4P4-201ENST00000435216 680 ntBASIC13.45□□□□□ -0.26
CLDN6P56747 NME6-208ENST00000435684 599 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN6P56747 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC13.45□□□□□ -0.26
CLDN6P56747 SERBP1P2-201ENST00000436888 1164 ntBASIC13.45□□□□□ -0.26
CLDN6P56747 BRI3P1-201ENST00000440440 378 ntBASIC13.45□□□□□ -0.26
CLDN6P56747 GALP-202ENST00000440823 889 ntTSL 5 BASIC13.45□□□□□ -0.26
CLDN6P56747 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CLDN6P56747 RN7SL351P-201ENST00000469306 248 ntBASIC13.45□□□□□ -0.26
CLDN6P56747 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC13.45□□□□□ -0.26
CLDN6P56747 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC13.45□□□□□ -0.26
CLDN6P56747 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.45□□□□□ -0.26
CLDN6P56747 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CLDN6P56747 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 AC126755.5-201ENST00000622756 267 ntBASIC13.45□□□□□ -0.26
CLDN6P56747 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.45□□□□□ -0.26
CLDN6P56747 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 AC015656.1-201ENST00000624209 3578 ntBASIC13.45□□□□□ -0.26
CLDN6P56747 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN6P56747 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.45□□□□□ -0.26
CLDN6P56747 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC13.45□□□□□ -0.26
CLDN6P56747 AC117503.4-201ENST00000623229 1418 ntBASIC13.45□□□□□ -0.26
CLDN6P56747 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CLDN6P56747 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CLDN6P56747 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CLDN6P56747 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.45□□□□□ -0.26
CLDN6P56747 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN6P56747 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CLDN6P56747 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.45□□□□□ -0.26
CLDN6P56747 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms