Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.63□□□□□ -0.39
CAV3P56539 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CAV3P56539 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.63□□□□□ -0.39
CAV3P56539 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.63□□□□□ -0.39
CAV3P56539 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.63□□□□□ -0.39
CAV3P56539 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.63□□□□□ -0.39
CAV3P56539 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.63□□□□□ -0.39
CAV3P56539 AC132938.2-201ENST00000579188 680 ntBASIC12.63□□□□□ -0.39
CAV3P56539 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CAV3P56539 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.63□□□□□ -0.39
CAV3P56539 AL591163.1-201ENST00000641757 987 ntBASIC12.63□□□□□ -0.39
CAV3P56539 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.63□□□□□ -0.39
CAV3P56539 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.63□□□□□ -0.39
CAV3P56539 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CAV3P56539 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.63□□□□□ -0.39
CAV3P56539 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.63□□□□□ -0.39
CAV3P56539 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CAV3P56539 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.63□□□□□ -0.39
CAV3P56539 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.63□□□□□ -0.39
CAV3P56539 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CAV3P56539 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CAV3P56539 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.63□□□□□ -0.39
CAV3P56539 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CAV3P56539 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CAV3P56539 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.62□□□□□ -0.39
CAV3P56539 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.62□□□□□ -0.39
CAV3P56539 AC063926.2-201ENST00000623766 1308 ntBASIC12.62□□□□□ -0.39
CAV3P56539 Z98257.2-202ENST00000641138 1548 ntBASIC12.62□□□□□ -0.39
CAV3P56539 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CAV3P56539 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CAV3P56539 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.62□□□□□ -0.39
CAV3P56539 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CAV3P56539 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CAV3P56539 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.62□□□□□ -0.39
CAV3P56539 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.62□□□□□ -0.39
CAV3P56539 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.62□□□□□ -0.39
CAV3P56539 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CAV3P56539 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.62□□□□□ -0.39
CAV3P56539 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.62□□□□□ -0.39
CAV3P56539 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
CAV3P56539 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.62□□□□□ -0.39
CAV3P56539 USP32P1-208ENST00000506594 1164 ntBASIC12.62□□□□□ -0.39
CAV3P56539 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.62□□□□□ -0.39
CAV3P56539 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.62□□□□□ -0.39
CAV3P56539 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.62□□□□□ -0.39
CAV3P56539 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.62□□□□□ -0.39
CAV3P56539 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.62□□□□□ -0.39
CAV3P56539 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.62□□□□□ -0.39
CAV3P56539 AC008735.3-201ENST00000596646 500 ntBASIC12.62□□□□□ -0.39
CAV3P56539 AC233724.13-201ENST00000598383 410 ntBASIC12.62□□□□□ -0.39
CAV3P56539 AC104506.1-201ENST00000609247 429 ntBASIC12.62□□□□□ -0.39
CAV3P56539 AL022328.1-201ENST00000610050 478 ntBASIC12.62□□□□□ -0.39
CAV3P56539 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.62□□□□□ -0.39
CAV3P56539 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CAV3P56539 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.62□□□□□ -0.39
CAV3P56539 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CAV3P56539 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CAV3P56539 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms