Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLCSP50747 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLCSP50747 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLCSP50747 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.53□□□□□ -0.24
HLCSP50747 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HLCSP50747 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.53□□□□□ -0.24
HLCSP50747 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLCSP50747 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLCSP50747 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLCSP50747 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLCSP50747 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLCSP50747 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLCSP50747 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HLCSP50747 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLCSP50747 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.53□□□□□ -0.24
HLCSP50747 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
HLCSP50747 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLCSP50747 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HLCSP50747 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HLCSP50747 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HLCSP50747 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.52□□□□□ -0.24
HLCSP50747 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.52□□□□□ -0.24
HLCSP50747 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.52□□□□□ -0.24
HLCSP50747 AGAP12P-201ENST00000585227 2359 ntBASIC13.52□□□□□ -0.24
HLCSP50747 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.52□□□□□ -0.24
HLCSP50747 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.52□□□□□ -0.24
HLCSP50747 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
HLCSP50747 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HLCSP50747 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HLCSP50747 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.52□□□□□ -0.25
HLCSP50747 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
HLCSP50747 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 AL662890.1-201ENST00000396818 632 ntBASIC13.52□□□□□ -0.25
HLCSP50747 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.52□□□□□ -0.25
HLCSP50747 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 HLA-J-204ENST00000495278 958 ntBASIC13.52□□□□□ -0.25
HLCSP50747 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.52□□□□□ -0.25
HLCSP50747 SNORD3B-2-202ENST00000571722 791 ntBASIC13.52□□□□□ -0.25
HLCSP50747 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.52□□□□□ -0.25
HLCSP50747 AL132994.2-201ENST00000603120 687 ntBASIC13.52□□□□□ -0.25
HLCSP50747 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 AL606495.2-201ENST00000605867 535 ntBASIC13.52□□□□□ -0.25
HLCSP50747 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 AL022323.5-201ENST00000624101 2059 ntBASIC13.52□□□□□ -0.25
HLCSP50747 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
HLCSP50747 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
HLCSP50747 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
HLCSP50747 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLCSP50747 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.51□□□□□ -0.25
HLCSP50747 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLCSP50747 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.51□□□□□ -0.25
HLCSP50747 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.51□□□□□ -0.25
HLCSP50747 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLCSP50747 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.51□□□□□ -0.25
HLCSP50747 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLCSP50747 VENTXP1-201ENST00000569334 2716 ntBASIC13.51□□□□□ -0.25
HLCSP50747 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLCSP50747 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.51□□□□□ -0.25
HLCSP50747 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLCSP50747 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLCSP50747 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.51□□□□□ -0.25
HLCSP50747 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HLCSP50747 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLCSP50747 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HLCSP50747 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLCSP50747 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLCSP50747 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLCSP50747 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLCSP50747 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.51□□□□□ -0.25
HLCSP50747 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLCSP50747 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLCSP50747 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
HLCSP50747 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLCSP50747 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLCSP50747 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLCSP50747 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
HLCSP50747 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLCSP50747 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.51□□□□□ -0.25
HLCSP50747 VDAC1P1-201ENST00000439229 848 ntBASIC13.51□□□□□ -0.25
HLCSP50747 SPTLC1P5-201ENST00000450718 252 ntBASIC13.51□□□□□ -0.25
HLCSP50747 AC125604.1-201ENST00000496255 707 ntBASIC13.51□□□□□ -0.25
HLCSP50747 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.51□□□□□ -0.25
HLCSP50747 SCARNA21-201ENST00000517026 139 ntBASIC13.51□□□□□ -0.25
HLCSP50747 AL160314.3-201ENST00000556041 767 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms