Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
MRE11P49959 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MRE11P49959 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRE11P49959 AL662890.1-201ENST00000396818 632 ntBASIC16.52■□□□□ 0.24
MRE11P49959 AC007969.1-201ENST00000433675 447 ntBASIC16.52■□□□□ 0.24
MRE11P49959 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.52■□□□□ 0.24
MRE11P49959 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.52■□□□□ 0.24
MRE11P49959 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.52■□□□□ 0.24
MRE11P49959 EIF4HP1-201ENST00000453115 687 ntBASIC16.52■□□□□ 0.24
MRE11P49959 SDHAP3-202ENST00000515467 728 ntBASIC16.52■□□□□ 0.24
MRE11P49959 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.52■□□□□ 0.24
MRE11P49959 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.52■□□□□ 0.24
MRE11P49959 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.52■□□□□ 0.24
MRE11P49959 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.52■□□□□ 0.24
MRE11P49959 AC103988.2-201ENST00000561804 725 ntBASIC16.52■□□□□ 0.24
MRE11P49959 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.52■□□□□ 0.24
MRE11P49959 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.52■□□□□ 0.24
MRE11P49959 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.52■□□□□ 0.24
MRE11P49959 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.52■□□□□ 0.24
MRE11P49959 AC025048.3-201ENST00000590609 569 ntBASIC16.52■□□□□ 0.24
MRE11P49959 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.52■□□□□ 0.24
MRE11P49959 AC093726.1-201ENST00000608064 963 ntBASIC16.52■□□□□ 0.24
MRE11P49959 AC005702.4-201ENST00000618393 416 ntBASIC16.52■□□□□ 0.24
MRE11P49959 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.52■□□□□ 0.24
MRE11P49959 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.52■□□□□ 0.24
MRE11P49959 AC124319.4-201ENST00000622931 2161 ntBASIC16.52■□□□□ 0.24
MRE11P49959 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC16.52■□□□□ 0.23
MRE11P49959 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
MRE11P49959 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MRE11P49959 AC022497.1-201ENST00000624916 3691 ntBASIC16.52■□□□□ 0.23
MRE11P49959 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MRE11P49959 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
MRE11P49959 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MRE11P49959 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
MRE11P49959 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MRE11P49959 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
MRE11P49959 AC002350.2-201ENST00000623894 1828 ntBASIC16.52■□□□□ 0.23
MRE11P49959 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC16.52■□□□□ 0.23
MRE11P49959 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
MRE11P49959 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC16.52■□□□□ 0.23
MRE11P49959 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MRE11P49959 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
MRE11P49959 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.51■□□□□ 0.23
MRE11P49959 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC16.51■□□□□ 0.23
MRE11P49959 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
MRE11P49959 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.51■□□□□ 0.23
MRE11P49959 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MRE11P49959 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 AC003102.2-201ENST00000589195 1469 ntBASIC16.51■□□□□ 0.23
MRE11P49959 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.51■□□□□ 0.23
MRE11P49959 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.51■□□□□ 0.23
MRE11P49959 RN7SL618P-201ENST00000477850 296 ntBASIC16.51■□□□□ 0.23
MRE11P49959 GAPDHP40-201ENST00000505218 1006 ntBASIC16.51■□□□□ 0.23
MRE11P49959 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.51■□□□□ 0.23
MRE11P49959 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.51■□□□□ 0.23
MRE11P49959 AC010328.2-201ENST00000597698 1111 ntBASIC16.51■□□□□ 0.23
MRE11P49959 RN7SL828P-201ENST00000607615 303 ntBASIC16.51■□□□□ 0.23
MRE11P49959 AL022328.3-201ENST00000607943 679 ntBASIC16.51■□□□□ 0.23
MRE11P49959 AL133215.2-201ENST00000609242 977 ntBASIC16.51■□□□□ 0.23
MRE11P49959 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.51■□□□□ 0.23
MRE11P49959 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
MRE11P49959 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
MRE11P49959 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MRE11P49959 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.51■□□□□ 0.23
MRE11P49959 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
MRE11P49959 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC16.51■□□□□ 0.23
MRE11P49959 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MRE11P49959 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC16.5■□□□□ 0.23
MRE11P49959 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC16.5■□□□□ 0.23
MRE11P49959 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRE11P49959 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MRE11P49959 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRE11P49959 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.5■□□□□ 0.23
MRE11P49959 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC16.5■□□□□ 0.23
MRE11P49959 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.5■□□□□ 0.23
MRE11P49959 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRE11P49959 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRE11P49959 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRE11P49959 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRE11P49959 USP17L6P-201ENST00000382470 1197 ntBASIC16.5■□□□□ 0.23
MRE11P49959 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.5■□□□□ 0.23
MRE11P49959 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.5■□□□□ 0.23
MRE11P49959 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms