Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 RFNG-202ENST00000429557 994 ntTSL 5 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 OR4C14P-201ENST00000440929 923 ntBASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 PHBP18-201ENST00000546648 813 ntBASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 RPS5-205ENST00000598495 800 ntTSL 3 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 AC026120.2-201ENST00000617239 309 ntBASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 AGAP7P-201ENST00000582299 2062 ntBASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 AGAP14-201ENST00000624701 2060 ntBASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZC3H4Q9UPT8 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 C8orf49-201ENST00000525043 1968 ntBASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 PGK1P2-201ENST00000431702 1214 ntBASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 RN7SL363P-201ENST00000482412 273 ntBASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 RNA5SP420-201ENST00000516997 137 ntBASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 AC133555.4-201ENST00000569081 152 ntBASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 AC091691.1-201ENST00000583587 1018 ntBASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 MIR5193-201ENST00000584510 109 ntBASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 AC123912.6-201ENST00000612657 315 ntBASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 GARS-210ENST00000627489 324 ntTSL 4 BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.77■□□□□ 0.28
ZC3H4Q9UPT8 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZC3H4Q9UPT8 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.77■□□□□ 0.27
ZC3H4Q9UPT8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZC3H4Q9UPT8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
ZC3H4Q9UPT8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZC3H4Q9UPT8 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
ZC3H4Q9UPT8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZC3H4Q9UPT8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZC3H4Q9UPT8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
ZC3H4Q9UPT8 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZC3H4Q9UPT8 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZC3H4Q9UPT8 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 CRIP1P2-201ENST00000425396 228 ntBASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC16.76■□□□□ 0.27
ZC3H4Q9UPT8 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms