Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VPS37AQ8NEZ2 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VPS37AQ8NEZ2 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
VPS37AQ8NEZ2 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.52□□□□□ -0.25
VPS37AQ8NEZ2 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VPS37AQ8NEZ2 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VPS37AQ8NEZ2 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.52□□□□□ -0.25
VPS37AQ8NEZ2 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VPS37AQ8NEZ2 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VPS37AQ8NEZ2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.52□□□□□ -0.25
VPS37AQ8NEZ2 AC068760.1-201ENST00000493579 1953 ntBASIC13.52□□□□□ -0.25
VPS37AQ8NEZ2 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VPS37AQ8NEZ2 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VPS37AQ8NEZ2 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VPS37AQ8NEZ2 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.52□□□□□ -0.25
VPS37AQ8NEZ2 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VPS37AQ8NEZ2 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
VPS37AQ8NEZ2 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 SHMT1P1-201ENST00000419974 1312 ntBASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 AC234783.1-201ENST00000441761 496 ntBASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 PGAM1P5-201ENST00000548011 764 ntBASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 AC003686.1-201ENST00000550956 1034 ntBASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.51□□□□□ -0.25
VPS37AQ8NEZ2 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VPS37AQ8NEZ2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms