Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 AC097724.1-201ENST00000609581 426 ntBASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 AL353770.1-201ENST00000614915 403 ntBASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 AC023794.5-201ENST00000564380 2157 ntBASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 OR2K2-202ENST00000374428 1038 ntBASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 AC026320.2-201ENST00000434379 478 ntBASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 RN7SL769P-201ENST00000469386 295 ntBASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 AC005740.1-201ENST00000515639 522 ntBASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 RNA5SP423-201ENST00000517127 109 ntBASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 AC242376.1-201ENST00000559033 726 ntBASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 AC026803.1-201ENST00000569130 274 ntBASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 AL139385.1-201ENST00000611744 3272 ntBASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 RCC2P1-201ENST00000452257 1476 ntBASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD3Q7Z3D4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 AL139158.3-201ENST00000641212 1562 ntBASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 KRT18P9-201ENST00000604826 1300 ntBASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 AL365181.3-201ENST00000605886 3222 ntBASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms