Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 AC005562.1-201ENST00000583030 3219 ntBASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 AC092638.2-201ENST00000441105 947 ntBASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 AC079112.1-201ENST00000454972 939 ntBASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 RN7SL788P-201ENST00000460504 316 ntBASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 AC095040.1-201ENST00000513286 675 ntBASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 RNA5SP417-201ENST00000516459 108 ntBASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 OR5BD1P-201ENST00000532527 817 ntBASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 U62317.3-201ENST00000608319 855 ntBASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 AL590824.1-201ENST00000403828 1349 ntBASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 TUBB8P4-201ENST00000511806 1324 ntBASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 PYY2-201ENST00000315776 282 ntBASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 LYPLA2P1-203ENST00000447689 696 ntBASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 RN7SL767P-201ENST00000493013 295 ntBASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 SLC25A15P3-201ENST00000505530 290 ntBASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 KLF17P1-201ENST00000547105 1126 ntBASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 AC145285.5-201ENST00000562217 361 ntBASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 AC007952.4-201ENST00000573866 637 ntBASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 RN7SL470P-201ENST00000583069 259 ntBASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 AP000322.3-201ENST00000608665 388 ntBASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 AC107464.3-201ENST00000609172 737 ntBASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 MIR6858-201ENST00000620733 67 ntBASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms