Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ANKRD55Q3KP44 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ANKRD55Q3KP44 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 MIR661-201ENST00000384842 89 ntBASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 SNORA50C-201ENST00000408535 133 ntBASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 AC093433.1-201ENST00000458048 571 ntBASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 AC123567.1-201ENST00000548294 1261 ntBASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 PIGL-212ENST00000581006 554 ntTSL 4 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 ATF5-205ENST00000600336 682 ntTSL 2 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 SNORA50.1-201ENST00000628590 135 ntBASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ANKRD55Q3KP44 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 AL358781.1-202ENST00000321081 1360 ntBASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 AL035633.1-201ENST00000406139 838 ntBASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 CICP12-201ENST00000455801 843 ntBASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 SLC9A3P3-201ENST00000457608 2229 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms