Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 AC131902.2-201ENST00000566892 2172 ntBASIC12.98□□□□□ -0.33
CLDN20P56880 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.98□□□□□ -0.33
CLDN20P56880 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CLDN20P56880 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 AP002353.1-201ENST00000528257 1599 ntBASIC12.98□□□□□ -0.33
CLDN20P56880 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.98□□□□□ -0.33
CLDN20P56880 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.98□□□□□ -0.33
CLDN20P56880 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN20P56880 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.97□□□□□ -0.33
CLDN20P56880 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
CLDN20P56880 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN20P56880 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
CLDN20P56880 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CLDN20P56880 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CLDN20P56880 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.97□□□□□ -0.33
CLDN20P56880 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CLDN20P56880 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.97□□□□□ -0.33
CLDN20P56880 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 AC239868.1-201ENST00000369385 493 ntBASIC12.97□□□□□ -0.33
CLDN20P56880 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN20P56880 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.97□□□□□ -0.33
CLDN20P56880 TSPY25P-201ENST00000429463 745 ntBASIC12.97□□□□□ -0.33
CLDN20P56880 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN20P56880 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 MIR3619-201ENST00000579667 83 ntBASIC12.97□□□□□ -0.33
CLDN20P56880 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.97□□□□□ -0.33
CLDN20P56880 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN20P56880 AL591471.1-201ENST00000621855 229 ntBASIC12.97□□□□□ -0.33
CLDN20P56880 AC138627.1-207ENST00000641560 1006 ntBASIC12.97□□□□□ -0.33
CLDN20P56880 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 LINC01165-201ENST00000445190 1623 ntBASIC12.97□□□□□ -0.33
CLDN20P56880 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.97□□□□□ -0.33
CLDN20P56880 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CLDN20P56880 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
CLDN20P56880 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.97□□□□□ -0.33
CLDN20P56880 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN20P56880 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
CLDN20P56880 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN20P56880 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN20P56880 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CLDN20P56880 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CLDN20P56880 HSPA8P5-201ENST00000456928 2069 ntBASIC12.97□□□□□ -0.33
CLDN20P56880 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDN20P56880 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN20P56880 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CLDN20P56880 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN20P56880 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
CLDN20P56880 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN20P56880 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.96□□□□□ -0.33
CLDN20P56880 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN20P56880 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.96□□□□□ -0.33
CLDN20P56880 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
CLDN20P56880 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN20P56880 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN20P56880 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN20P56880 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN20P56880 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN20P56880 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN20P56880 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CLDN20P56880 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN20P56880 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CLDN20P56880 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CLDN20P56880 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.96□□□□□ -0.33
CLDN20P56880 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN20P56880 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN20P56880 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN20P56880 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.96□□□□□ -0.33
CLDN20P56880 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDN20P56880 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDN20P56880 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CLDN20P56880 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CLDN20P56880 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.96□□□□□ -0.33
CLDN20P56880 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.96□□□□□ -0.33
CLDN20P56880 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.96□□□□□ -0.33
CLDN20P56880 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.96□□□□□ -0.33
CLDN20P56880 AC090386.2-201ENST00000623010 1039 ntBASIC12.96□□□□□ -0.33
CLDN20P56880 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.96□□□□□ -0.33
CLDN20P56880 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN20P56880 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms